Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 AC138907.5-202ENST00000569484 235 ntBASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPA1Q9UND3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPA1Q9UND3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA1Q9UND3 FBXW4P1-201ENST00000426721 2239 ntBASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA1Q9UND3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 KRT18P20-201ENST00000548986 1279 ntBASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 AP006587.3-201ENST00000525742 1516 ntBASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 FAM99A-202ENST00000538190 1989 ntBASIC19.28■□□□□ 0.68
NPIPA1Q9UND3 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 TSPY6P-201ENST00000448518 926 ntBASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms