Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT11Q9UKZ1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.08■□□□□ 0.81
CNOT11Q9UKZ1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CNOT11Q9UKZ1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.08■□□□□ 0.81
CNOT11Q9UKZ1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.08■□□□□ 0.81
CNOT11Q9UKZ1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.08■□□□□ 0.81
CNOT11Q9UKZ1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT11Q9UKZ1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.08■□□□□ 0.81
CNOT11Q9UKZ1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.08■□□□□ 0.81
CNOT11Q9UKZ1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.08■□□□□ 0.8
CNOT11Q9UKZ1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 MIR572-201ENST00000384983 95 ntBASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CNOT11Q9UKZ1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT11Q9UKZ1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT11Q9UKZ1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT11Q9UKZ1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms