Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
KCNIP1Q9NZI2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 TSPY26P-201ENST00000476365 1326 ntBASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 EDA-201ENST00000338901 1233 ntBASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 AC106739.1-201ENST00000617035 715 ntBASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP1Q9NZI2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.54■□□□□ 0.4
KCNIP1Q9NZI2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 AL049796.1-201ENST00000565336 1766 ntBASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 AL355001.2-201ENST00000620617 1191 ntBASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNIP1Q9NZI2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNIP1Q9NZI2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
KCNIP1Q9NZI2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KCNIP1Q9NZI2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
KCNIP1Q9NZI2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
KCNIP1Q9NZI2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
KCNIP1Q9NZI2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KCNIP1Q9NZI2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
KCNIP1Q9NZI2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KCNIP1Q9NZI2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KCNIP1Q9NZI2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNIP1Q9NZI2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms