Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 AL137060.1-201ENST00000618151 2648 ntBASIC19.45■□□□□ 0.7
POLE3Q9NRF9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 EEF1DP3-203ENST00000566025 782 ntBASIC19.45■□□□□ 0.7
POLE3Q9NRF9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLE3Q9NRF9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 AL049796.1-201ENST00000565336 1766 ntBASIC19.44■□□□□ 0.7
POLE3Q9NRF9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLE3Q9NRF9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 AC005229.4-201ENST00000610085 2198 ntBASIC19.43■□□□□ 0.7
POLE3Q9NRF9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.43■□□□□ 0.7
POLE3Q9NRF9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLE3Q9NRF9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.42■□□□□ 0.7
POLE3Q9NRF9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLE3Q9NRF9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLE3Q9NRF9 MIR6084-201ENST00000622012 110 ntBASIC19.42■□□□□ 0.7
POLE3Q9NRF9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.42■□□□□ 0.7
POLE3Q9NRF9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLE3Q9NRF9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLE3Q9NRF9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLE3Q9NRF9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.42■□□□□ 0.7
POLE3Q9NRF9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
POLE3Q9NRF9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.41■□□□□ 0.7
POLE3Q9NRF9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 AC079140.4-201ENST00000507448 529 ntBASIC19.4■□□□□ 0.7
POLE3Q9NRF9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.4■□□□□ 0.7
POLE3Q9NRF9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
POLE3Q9NRF9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLE3Q9NRF9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 AC123595.1-201ENST00000440769 1046 ntBASIC19.39■□□□□ 0.69
POLE3Q9NRF9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 LINC02228-203ENST00000641970 1355 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms