Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 AP005212.1-201ENST00000581547 1997 ntBASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 AC131212.1-201ENST00000613771 668 ntBASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 AC105233.4-201ENST00000642045 216 ntBASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 TSPY26P-201ENST00000476365 1326 ntBASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBB1Q9H4B7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBB1Q9H4B7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBB1Q9H4B7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 AC096631.2-201ENST00000436136 790 ntBASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 GABARAPL3-202ENST00000624044 1851 ntBASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 AC121338.2-201ENST00000622535 1744 ntBASIC20.19■□□□□ 0.82
TUBB1Q9H4B7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 BX005040.4-201ENST00000637145 1518 ntBASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 PBX2P1-201ENST00000493219 1291 ntBASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 AP001330.3-201ENST00000520123 633 ntBASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 AC027682.1-201ENST00000562846 899 ntBASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TUBB1Q9H4B7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB1Q9H4B7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms