Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MS4A6AQ9H2W1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MS4A6AQ9H2W1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.08■□□□□ 0.17
MS4A6AQ9H2W1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
MS4A6AQ9H2W1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.08■□□□□ 0.16
MS4A6AQ9H2W1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 AC104564.3-201ENST00000582367 638 ntBASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 MIR6084-201ENST00000622012 110 ntBASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A6AQ9H2W1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A6AQ9H2W1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 AC005224.4-201ENST00000583262 1652 ntBASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 AC003102.1-202ENST00000563394 1796 ntBASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.05■□□□□ 0.16
MS4A6AQ9H2W1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A6AQ9H2W1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms