Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM2Q9C040 AC097381.1-201ENST00000429019 1296 ntBASIC19.25■□□□□ 0.67
TRIM2Q9C040 AL354811.1-201ENST00000610286 706 ntBASIC19.25■□□□□ 0.67
TRIM2Q9C040 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.25■□□□□ 0.67
TRIM2Q9C040 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM2Q9C040 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
TRIM2Q9C040 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM2Q9C040 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM2Q9C040 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM2Q9C040 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM2Q9C040 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM2Q9C040 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRIM2Q9C040 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM2Q9C040 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM2Q9C040 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRIM2Q9C040 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.24■□□□□ 0.67
TRIM2Q9C040 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM2Q9C040 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.24■□□□□ 0.67
TRIM2Q9C040 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM2Q9C040 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM2Q9C040 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM2Q9C040 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM2Q9C040 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM2Q9C040 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM2Q9C040 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM2Q9C040 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM2Q9C040 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM2Q9C040 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM2Q9C040 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM2Q9C040 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM2Q9C040 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM2Q9C040 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM2Q9C040 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM2Q9C040 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM2Q9C040 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM2Q9C040 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM2Q9C040 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM2Q9C040 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM2Q9C040 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM2Q9C040 AL358852.1-201ENST00000623174 1268 ntBASIC19.22■□□□□ 0.67
TRIM2Q9C040 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM2Q9C040 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM2Q9C040 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM2Q9C040 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM2Q9C040 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM2Q9C040 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM2Q9C040 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM2Q9C040 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM2Q9C040 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM2Q9C040 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM2Q9C040 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM2Q9C040 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM2Q9C040 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM2Q9C040 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM2Q9C040 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM2Q9C040 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM2Q9C040 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM2Q9C040 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM2Q9C040 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM2Q9C040 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM2Q9C040 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM2Q9C040 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM2Q9C040 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM2Q9C040 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM2Q9C040 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM2Q9C040 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM2Q9C040 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM2Q9C040 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM2Q9C040 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM2Q9C040 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM2Q9C040 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM2Q9C040 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM2Q9C040 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM2Q9C040 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM2Q9C040 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM2Q9C040 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM2Q9C040 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM2Q9C040 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM2Q9C040 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM2Q9C040 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.19■□□□□ 0.66
TRIM2Q9C040 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM2Q9C040 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM2Q9C040 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM2Q9C040 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM2Q9C040 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM2Q9C040 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.19■□□□□ 0.66
TRIM2Q9C040 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM2Q9C040 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM2Q9C040 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms