Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM47Q9BQJ4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.49■■□□□ 1.51
TMEM47Q9BQJ4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM47Q9BQJ4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.49■■□□□ 1.51
TMEM47Q9BQJ4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM47Q9BQJ4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.49■■□□□ 1.51
TMEM47Q9BQJ4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 AC243732.1-201ENST00000612648 864 ntBASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM47Q9BQJ4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 FBXW4P1-201ENST00000426721 2239 ntBASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM47Q9BQJ4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM47Q9BQJ4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.51
TMEM47Q9BQJ4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
TMEM47Q9BQJ4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.45■■□□□ 1.51
TMEM47Q9BQJ4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.45■■□□□ 1.5
TMEM47Q9BQJ4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM47Q9BQJ4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
TMEM47Q9BQJ4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM47Q9BQJ4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
TMEM47Q9BQJ4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM47Q9BQJ4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
TMEM47Q9BQJ4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM47Q9BQJ4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM47Q9BQJ4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM47Q9BQJ4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM47Q9BQJ4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
TMEM47Q9BQJ4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.44■■□□□ 1.5
TMEM47Q9BQJ4 AC104771.1-201ENST00000603335 964 ntBASIC24.44■■□□□ 1.5
TMEM47Q9BQJ4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM47Q9BQJ4 AC244015.2-201ENST00000616358 1861 ntBASIC24.43■■□□□ 1.5
TMEM47Q9BQJ4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.43■■□□□ 1.5
TMEM47Q9BQJ4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.43■■□□□ 1.5
TMEM47Q9BQJ4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.43■■□□□ 1.5
TMEM47Q9BQJ4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.43■■□□□ 1.5
TMEM47Q9BQJ4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.43■■□□□ 1.5
TMEM47Q9BQJ4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
TMEM47Q9BQJ4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM47Q9BQJ4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 GPX1P1-201ENST00000388829 606 ntBASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 CYP2T1P-201ENST00000432607 1285 ntBASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 AC083906.2-201ENST00000511578 360 ntBASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 AL121832.2-201ENST00000610979 668 ntBASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 AL109923.1-201ENST00000618799 583 ntBASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.42■■□□□ 1.5
TMEM47Q9BQJ4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.41■■□□□ 1.5
TMEM47Q9BQJ4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
TMEM47Q9BQJ4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM47Q9BQJ4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms