Protein–RNA interactions for Protein: Q96NJ6

ZFP3, Zinc finger protein 3 homolog, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP3Q96NJ6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 KRT18P11-201ENST00000435214 1283 ntBASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.17■□□□□ 0.66
ZFP3Q96NJ6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ZFP3Q96NJ6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 AC073130.3-201ENST00000624389 2278 ntBASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 KRT18P61-201ENST00000585825 1298 ntBASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 KRT87P-202ENST00000534226 1464 ntBASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZFP3Q96NJ6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
ZFP3Q96NJ6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZFP3Q96NJ6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.14■□□□□ 0.66
ZFP3Q96NJ6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
ZFP3Q96NJ6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZFP3Q96NJ6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZFP3Q96NJ6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ZFP3Q96NJ6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFP3Q96NJ6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.14■□□□□ 0.65
ZFP3Q96NJ6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFP3Q96NJ6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.14■□□□□ 0.65
ZFP3Q96NJ6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ZFP3Q96NJ6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.14■□□□□ 0.65
ZFP3Q96NJ6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZFP3Q96NJ6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFP3Q96NJ6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZFP3Q96NJ6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 OR7E47P-201ENST00000546390 1422 ntBASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZFP3Q96NJ6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 FAM99A-202ENST00000538190 1989 ntBASIC19.12■□□□□ 0.65
ZFP3Q96NJ6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZFP3Q96NJ6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms