Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS9Q8WXC6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
COPS9Q8WXC6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS9Q8WXC6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 C17orf82-201ENST00000623772 1530 ntBASIC14.17□□□□□ -0.14
COPS9Q8WXC6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.17□□□□□ -0.14
COPS9Q8WXC6 AL049796.1-201ENST00000565336 1766 ntBASIC14.17□□□□□ -0.14
COPS9Q8WXC6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms