Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC145676.1-201ENST00000514988 2004 ntBASIC19.26■□□□□ 0.67
CHD6Q8TD26 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD6Q8TD26 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD6Q8TD26 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD6Q8TD26 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD6Q8TD26 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHD6Q8TD26 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD6Q8TD26 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD6Q8TD26 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CHD6Q8TD26 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD6Q8TD26 AF186192.3-201ENST00000583427 947 ntBASIC19.25■□□□□ 0.67
CHD6Q8TD26 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD6Q8TD26 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD6Q8TD26 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD6Q8TD26 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHD6Q8TD26 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD6Q8TD26 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD6Q8TD26 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD6Q8TD26 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD6Q8TD26 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
CHD6Q8TD26 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
CHD6Q8TD26 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.25■□□□□ 0.67
CHD6Q8TD26 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD6Q8TD26 AC079598.2-202ENST00000546624 1451 ntBASIC19.25■□□□□ 0.67
CHD6Q8TD26 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD6Q8TD26 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD6Q8TD26 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD6Q8TD26 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD6Q8TD26 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 OR7E47P-201ENST00000546390 1422 ntBASIC19.24■□□□□ 0.67
CHD6Q8TD26 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD6Q8TD26 AC063952.2-201ENST00000498792 1227 ntBASIC19.24■□□□□ 0.67
CHD6Q8TD26 AP000525.1-201ENST00000608286 694 ntBASIC19.24■□□□□ 0.67
CHD6Q8TD26 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD6Q8TD26 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 KRT16P2-201ENST00000414673 1423 ntBASIC19.24■□□□□ 0.67
CHD6Q8TD26 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.24■□□□□ 0.67
CHD6Q8TD26 AL034346.1-201ENST00000568244 1277 ntBASIC19.24■□□□□ 0.67
CHD6Q8TD26 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD6Q8TD26 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD6Q8TD26 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD6Q8TD26 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CHD6Q8TD26 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD6Q8TD26 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHD6Q8TD26 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD6Q8TD26 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHD6Q8TD26 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD6Q8TD26 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD6Q8TD26 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD6Q8TD26 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD6Q8TD26 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD6Q8TD26 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD6Q8TD26 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD6Q8TD26 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD6Q8TD26 AC100791.3-201ENST00000617619 330 ntBASIC19.23■□□□□ 0.67
CHD6Q8TD26 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.22■□□□□ 0.67
CHD6Q8TD26 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.22■□□□□ 0.67
CHD6Q8TD26 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD6Q8TD26 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD6Q8TD26 AK4P3-201ENST00000418260 669 ntBASIC19.22■□□□□ 0.67
CHD6Q8TD26 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.22■□□□□ 0.67
CHD6Q8TD26 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD6Q8TD26 AC022616.7-201ENST00000525383 220 ntBASIC19.22■□□□□ 0.67
CHD6Q8TD26 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD6Q8TD26 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD6Q8TD26 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD6Q8TD26 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD6Q8TD26 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD6Q8TD26 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.22■□□□□ 0.67
CHD6Q8TD26 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD6Q8TD26 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.22■□□□□ 0.67
CHD6Q8TD26 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD6Q8TD26 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.21■□□□□ 0.67
CHD6Q8TD26 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.21■□□□□ 0.67
CHD6Q8TD26 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD6Q8TD26 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.21■□□□□ 0.67
CHD6Q8TD26 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CHD6Q8TD26 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD6Q8TD26 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD6Q8TD26 AC027702.1-201ENST00000563810 1770 ntBASIC19.21■□□□□ 0.67
CHD6Q8TD26 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD6Q8TD26 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CHD6Q8TD26 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD6Q8TD26 FAM8A6P-201ENST00000407496 1135 ntBASIC19.21■□□□□ 0.67
CHD6Q8TD26 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD6Q8TD26 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.21■□□□□ 0.67
CHD6Q8TD26 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD6Q8TD26 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CHD6Q8TD26 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.21■□□□□ 0.67
CHD6Q8TD26 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD6Q8TD26 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CHD6Q8TD26 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms