Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 MIR639-201ENST00000384974 98 ntBASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM11BQ8TCY0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 AC079089.2-201ENST00000531211 1277 ntBASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 AC027702.1-201ENST00000563810 1770 ntBASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11BQ8TCY0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 AC112907.3-201ENST00000577781 2400 ntBASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 OR7E47P-201ENST00000546390 1422 ntBASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 PLK5-205ENST00000642079 1969 ntBASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11BQ8TCY0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC13.58□□□□□ -0.23
SMIM11BQ8TCY0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SMIM11BQ8TCY0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 SNX5-217ENST00000606557 1087 ntBASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 AC020907.5-201ENST00000624372 1936 ntBASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM11BQ8TCY0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM11BQ8TCY0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms