Protein–RNA interactions for Protein: Q8TA86

RP9, Retinitis pigmentosa 9 protein, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP9Q8TA86 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RP9Q8TA86 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.14■□□□□ 0.82
RP9Q8TA86 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RP9Q8TA86 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RP9Q8TA86 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.14■□□□□ 0.81
RP9Q8TA86 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.14■□□□□ 0.81
RP9Q8TA86 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RP9Q8TA86 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RP9Q8TA86 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.14■□□□□ 0.81
RP9Q8TA86 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RP9Q8TA86 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RP9Q8TA86 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RP9Q8TA86 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RP9Q8TA86 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RP9Q8TA86 PCDHAC2-203ENST00000615316 3011 ntBASIC20.13■□□□□ 0.81
RP9Q8TA86 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.13■□□□□ 0.81
RP9Q8TA86 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.13■□□□□ 0.81
RP9Q8TA86 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RP9Q8TA86 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RP9Q8TA86 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
RP9Q8TA86 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RP9Q8TA86 AC007225.1-201ENST00000566331 1836 ntBASIC20.13■□□□□ 0.81
RP9Q8TA86 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RP9Q8TA86 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RP9Q8TA86 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RP9Q8TA86 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.13■□□□□ 0.81
RP9Q8TA86 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.12■□□□□ 0.81
RP9Q8TA86 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RP9Q8TA86 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
RP9Q8TA86 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RP9Q8TA86 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RP9Q8TA86 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RP9Q8TA86 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RP9Q8TA86 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
RP9Q8TA86 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.12■□□□□ 0.81
RP9Q8TA86 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RP9Q8TA86 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RP9Q8TA86 AC099791.2-201ENST00000605725 427 ntBASIC20.12■□□□□ 0.81
RP9Q8TA86 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RP9Q8TA86 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.12■□□□□ 0.81
RP9Q8TA86 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RP9Q8TA86 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
RP9Q8TA86 AP006587.3-201ENST00000525742 1516 ntBASIC20.12■□□□□ 0.81
RP9Q8TA86 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
RP9Q8TA86 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.11■□□□□ 0.81
RP9Q8TA86 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 TSPY9P-201ENST00000440215 945 ntBASIC20.11■□□□□ 0.81
RP9Q8TA86 TSPY11P-201ENST00000442607 1045 ntBASIC20.11■□□□□ 0.81
RP9Q8TA86 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 MIR3181-201ENST00000578512 73 ntBASIC20.11■□□□□ 0.81
RP9Q8TA86 MIR6724-1-201ENST00000616420 92 ntBASIC20.11■□□□□ 0.81
RP9Q8TA86 MIR6724-2-201ENST00000616483 92 ntBASIC20.11■□□□□ 0.81
RP9Q8TA86 MIR6724-4-201ENST00000617390 92 ntBASIC20.11■□□□□ 0.81
RP9Q8TA86 MIR6724-3-201ENST00000622482 92 ntBASIC20.11■□□□□ 0.81
RP9Q8TA86 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.11■□□□□ 0.81
RP9Q8TA86 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RP9Q8TA86 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RP9Q8TA86 RNF165-205ENST00000588679 2904 ntBASIC20.1■□□□□ 0.81
RP9Q8TA86 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RP9Q8TA86 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RP9Q8TA86 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RP9Q8TA86 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RP9Q8TA86 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.1■□□□□ 0.81
RP9Q8TA86 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RP9Q8TA86 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RP9Q8TA86 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RP9Q8TA86 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.1■□□□□ 0.81
RP9Q8TA86 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.1■□□□□ 0.81
RP9Q8TA86 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RP9Q8TA86 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
RP9Q8TA86 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RP9Q8TA86 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RP9Q8TA86 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RP9Q8TA86 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RP9Q8TA86 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RP9Q8TA86 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.09■□□□□ 0.81
RP9Q8TA86 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RP9Q8TA86 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RP9Q8TA86 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RP9Q8TA86 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.09■□□□□ 0.81
RP9Q8TA86 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.09■□□□□ 0.81
RP9Q8TA86 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.09■□□□□ 0.81
RP9Q8TA86 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RP9Q8TA86 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RP9Q8TA86 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RP9Q8TA86 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RP9Q8TA86 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RP9Q8TA86 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RP9Q8TA86 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RP9Q8TA86 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RP9Q8TA86 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms