Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS52Q8N1B4 AC137767.1-201ENST00000602918 1920 ntBASIC22.67■■□□□ 1.22
VPS52Q8N1B4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 ECEL1P1-201ENST00000373592 1742 ntBASIC22.66■■□□□ 1.22
VPS52Q8N1B4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 AC120498.10-201ENST00000621827 505 ntBASIC22.66■■□□□ 1.22
VPS52Q8N1B4 OR10C1-204ENST00000622521 1039 ntBASIC22.66■■□□□ 1.22
VPS52Q8N1B4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS52Q8N1B4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 LINC00565-201ENST00000562710 2331 ntBASIC22.65■■□□□ 1.22
VPS52Q8N1B4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 AC008175.2-201ENST00000612840 297 ntBASIC22.65■■□□□ 1.22
VPS52Q8N1B4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 AC008694.1-202ENST00000636953 945 ntBASIC22.65■■□□□ 1.22
VPS52Q8N1B4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS52Q8N1B4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
VPS52Q8N1B4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.64■■□□□ 1.21
VPS52Q8N1B4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS52Q8N1B4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 AC127496.7-201ENST00000625110 1798 ntBASIC22.63■■□□□ 1.21
VPS52Q8N1B4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 AC087742.1-201ENST00000575880 1738 ntBASIC22.63■■□□□ 1.21
VPS52Q8N1B4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 AC093787.1-201ENST00000450396 207 ntBASIC22.63■■□□□ 1.21
VPS52Q8N1B4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 AC069236.1-201ENST00000604339 616 ntBASIC22.63■■□□□ 1.21
VPS52Q8N1B4 AC016405.3-201ENST00000607710 860 ntBASIC22.63■■□□□ 1.21
VPS52Q8N1B4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS52Q8N1B4 AC242852.2-201ENST00000615738 1807 ntBASIC22.63■■□□□ 1.21
VPS52Q8N1B4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms