Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CROCCP2Q86T23 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.28■■□□□ 1
CROCCP2Q86T23 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CROCCP2Q86T23 AL031848.2-201ENST00000607670 837 ntBASIC21.28■■□□□ 1
CROCCP2Q86T23 AC092028.1-203ENST00000608262 953 ntBASIC21.28■■□□□ 1
CROCCP2Q86T23 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.28■■□□□ 1
CROCCP2Q86T23 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CROCCP2Q86T23 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CROCCP2Q86T23 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CROCCP2Q86T23 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CROCCP2Q86T23 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.28■■□□□ 1
CROCCP2Q86T23 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.28■■□□□ 1
CROCCP2Q86T23 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CROCCP2Q86T23 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.27■■□□□ 1
CROCCP2Q86T23 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CROCCP2Q86T23 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.27■■□□□ 1
CROCCP2Q86T23 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.27■■□□□ 1
CROCCP2Q86T23 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.27■■□□□ 1
CROCCP2Q86T23 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CROCCP2Q86T23 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.27■■□□□ 1
CROCCP2Q86T23 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.27■■□□□ 1
CROCCP2Q86T23 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CROCCP2Q86T23 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.27■■□□□ 1
CROCCP2Q86T23 AC027702.1-201ENST00000563810 1770 ntBASIC21.27■■□□□ 1
CROCCP2Q86T23 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.27■■□□□ 1
CROCCP2Q86T23 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CROCCP2Q86T23 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CROCCP2Q86T23 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CROCCP2Q86T23 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CROCCP2Q86T23 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CROCCP2Q86T23 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 AC121338.2-201ENST00000622535 1744 ntBASIC21.26■□□□□ 0.99
CROCCP2Q86T23 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 MTDHP2-201ENST00000601468 714 ntBASIC21.26■□□□□ 0.99
CROCCP2Q86T23 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CROCCP2Q86T23 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.25■□□□□ 0.99
CROCCP2Q86T23 AC007225.1-201ENST00000566331 1836 ntBASIC21.25■□□□□ 0.99
CROCCP2Q86T23 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.24■□□□□ 0.99
CROCCP2Q86T23 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 AP004607.7-201ENST00000527152 1677 ntBASIC21.23■□□□□ 0.99
CROCCP2Q86T23 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms