Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 ABHD17AP4-201ENST00000411545 909 ntBASIC10.51□□□□□ -0.73
LINC01554Q52M75 MIR3648-2-201ENST00000581792 180 ntBASIC10.51□□□□□ -0.73
LINC01554Q52M75 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC01554Q52M75 MIR3648-1-201ENST00000615959 180 ntBASIC10.51□□□□□ -0.73
LINC01554Q52M75 C8orf49-201ENST00000525043 1968 ntBASIC10.51□□□□□ -0.73
LINC01554Q52M75 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
LINC01554Q52M75 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01554Q52M75 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01554Q52M75 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01554Q52M75 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC01554Q52M75 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC01554Q52M75 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 SMPD5-203ENST00000639008 1464 ntBASIC10.5□□□□□ -0.73
LINC01554Q52M75 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01554Q52M75 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC01554Q52M75 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
LINC01554Q52M75 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC10.5□□□□□ -0.73
LINC01554Q52M75 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC01554Q52M75 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01554Q52M75 GUSBP5-202ENST00000510805 1989 ntBASIC10.5□□□□□ -0.73
LINC01554Q52M75 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01554Q52M75 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01554Q52M75 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
LINC01554Q52M75 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 ADM-207ENST00000530439 1839 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01554Q52M75 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC01554Q52M75 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LINC01554Q52M75 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
LINC01554Q52M75 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC01554Q52M75 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 PFN2-211ENST00000489155 636 ntTSL 4 BASIC10.49□□□□□ -0.73
LINC01554Q52M75 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01554Q52M75 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 REST-210ENST00000638187 1334 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC01554Q52M75 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LINC01554Q52M75 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01554Q52M75 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 LSR-205ENST00000427250 1606 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms