Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEP78395 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEP78395 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEP78395 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEP78395 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.08■□□□□ 0.97
PRAMEP78395 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEP78395 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEP78395 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEP78395 AC027612.3-201ENST00000413684 1047 ntBASIC21.08■□□□□ 0.97
PRAMEP78395 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.08■□□□□ 0.97
PRAMEP78395 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.08■□□□□ 0.97
PRAMEP78395 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEP78395 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PRAMEP78395 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEP78395 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.08■□□□□ 0.97
PRAMEP78395 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.08■□□□□ 0.97
PRAMEP78395 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRAMEP78395 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.08■□□□□ 0.96
PRAMEP78395 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.08■□□□□ 0.96
PRAMEP78395 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PRAMEP78395 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.08■□□□□ 0.96
PRAMEP78395 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.07■□□□□ 0.96
PRAMEP78395 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEP78395 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
PRAMEP78395 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEP78395 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEP78395 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.07■□□□□ 0.96
PRAMEP78395 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEP78395 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEP78395 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.06■□□□□ 0.96
PRAMEP78395 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEP78395 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PRAMEP78395 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEP78395 AC079140.4-201ENST00000507448 529 ntBASIC21.06■□□□□ 0.96
PRAMEP78395 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.06■□□□□ 0.96
PRAMEP78395 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.06■□□□□ 0.96
PRAMEP78395 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEP78395 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEP78395 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEP78395 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEP78395 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEP78395 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEP78395 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
PRAMEP78395 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
PRAMEP78395 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.05■□□□□ 0.96
PRAMEP78395 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEP78395 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEP78395 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEP78395 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEP78395 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEP78395 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEP78395 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.05■□□□□ 0.96
PRAMEP78395 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.05■□□□□ 0.96
PRAMEP78395 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.05■□□□□ 0.96
PRAMEP78395 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEP78395 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.05■□□□□ 0.96
PRAMEP78395 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEP78395 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEP78395 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.05■□□□□ 0.96
PRAMEP78395 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEP78395 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEP78395 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PRAMEP78395 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.04■□□□□ 0.96
PRAMEP78395 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEP78395 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEP78395 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.04■□□□□ 0.96
PRAMEP78395 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PRAMEP78395 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.04■□□□□ 0.96
PRAMEP78395 LINC02228-203ENST00000641970 1355 ntBASIC21.04■□□□□ 0.96
PRAMEP78395 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEP78395 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEP78395 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEP78395 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEP78395 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.03■□□□□ 0.96
PRAMEP78395 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PRAMEP78395 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEP78395 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.03■□□□□ 0.96
PRAMEP78395 AC053503.5-201ENST00000601508 636 ntBASIC21.03■□□□□ 0.96
PRAMEP78395 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEP78395 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEP78395 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEP78395 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.03■□□□□ 0.96
PRAMEP78395 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEP78395 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEP78395 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.02■□□□□ 0.96
PRAMEP78395 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEP78395 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms