Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.62e-7■■■■□ 24.9
SUB1P53999 MKRN1-209ENST00000475010 3467 ntTSL 211.08□□□□□ -0.642e-7■■■■□ 24.9
SUB1P53999 MKRN1-211ENST00000480552 906 ntTSL 5 BASIC7.64□□□□□ -1.192e-7■■■■□ 24.9
SUB1P53999 H3F3B-209ENST00000589949 842 ntTSL 213.14□□□□□ -0.317e-15■■■■□ 24.9
SUB1P53999 COX4I1-217ENST00000569997 3946 nt7.88□□□□□ -1.158e-12■■■■□ 24.9
SUB1P53999 CCND2-201ENST00000261254 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.862e-6■■■■□ 24.9
SUB1P53999 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.322e-6■■■■□ 24.9
SUB1P53999 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.352e-6■■■■□ 24.9
SUB1P53999 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.726e-22■■■■□ 24.8
SUB1P53999 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.825e-9■■■■□ 24.8
SUB1P53999 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.351e-6■■■■□ 24.8
SUB1P53999 PSME4-201ENST00000389993 6581 ntTSL 1 (best)12.7□□□□□ -0.385e-6■■■■□ 24.8
SUB1P53999 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.485e-6■■■■□ 24.8
SUB1P53999 PSME4-206ENST00000476586 1422 ntTSL 1 (best)5.3□□□□□ -1.565e-6■■■■□ 24.8
SUB1P53999 PSME4-209ENST00000488687 3073 ntTSL 24.97□□□□□ -1.615e-6■■■■□ 24.8
SUB1P53999 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.71e-6■■■■□ 24.8
SUB1P53999 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.812e-8■■■■□ 24.8
SUB1P53999 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.281e-9■■■■□ 24.8
SUB1P53999 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.391e-9■■■■□ 24.8
SUB1P53999 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11□□□□□ -0.652e-8■■■■□ 24.8
SUB1P53999 FANCI-207ENST00000564636 777 ntTSL 37.4□□□□□ -1.221e-9■■■■□ 24.8
SUB1P53999 MED14-202ENST00000416199 557 ntTSL 26.14□□□□□ -1.431e-9■■■■□ 24.8
SUB1P53999 FANCI-210ENST00000565522 233 ntTSL 51.26□□□□□ -2.211e-9■■■■□ 24.8
SUB1P53999 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.191e-6■■■■□ 24.8
SUB1P53999 NARS-201ENST00000256854 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.96e-7■■■■□ 24.8
SUB1P53999 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.632e-7■■■■□ 24.7
SUB1P53999 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.31■□□□□ 0.362e-7■■■■□ 24.7
SUB1P53999 EPCAM-204ENST00000456133 1501 ntTSL 59.42□□□□□ -0.92e-7■■■■□ 24.7
SUB1P53999 PSMD13-205ENST00000526783 892 ntTSL 57.26□□□□□ -1.252e-7■■■■□ 24.7
SUB1P53999 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.81e-7■■■■□ 24.7
SUB1P53999 ZPR1-204ENST00000429220 2364 ntTSL 511.49□□□□□ -0.572e-12■■■■□ 24.7
SUB1P53999 ZPR1-201ENST00000227322 6566 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.842e-12■■■■□ 24.7
SUB1P53999 ZPR1-206ENST00000444935 2497 ntTSL 59.09□□□□□ -0.952e-12■■■■□ 24.7
SUB1P53999 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.042e-6■■■■□ 24.6
SUB1P53999 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.282e-6■■■■□ 24.6
SUB1P53999 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.03□□□□□ -0.322e-6■■■■□ 24.6
SUB1P53999 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.332e-6■■■■□ 24.6
SUB1P53999 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.422e-6■■■■□ 24.6
SUB1P53999 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.772e-6■■■■□ 24.6
SUB1P53999 FAM49B-220ENST00000522250 1647 ntTSL 5 BASIC8.44□□□□□ -1.062e-6■■■■□ 24.6
SUB1P53999 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.462e-6■■■■□ 24.6
SUB1P53999 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.882e-6■■■■□ 24.6
SUB1P53999 FAM49B-225ENST00000523288 4552 ntTSL 23.2□□□□□ -1.92e-6■■■■□ 24.6
SUB1P53999 PARK7-205ENST00000460192 567 ntTSL 312.83□□□□□ -0.364e-7■■■■□ 24.6
SUB1P53999 PARK7-206ENST00000465354 949 ntTSL 210.42□□□□□ -0.744e-7■■■■□ 24.6
SUB1P53999 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.49□□□□□ -1.692e-9■■■■□ 24.6
SUB1P53999 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.252e-6■■■■□ 24.5
SUB1P53999 ERH-202ENST00000555373 586 ntTSL 2 BASIC8.26□□□□□ -1.099e-14■■■■□ 24.5
SUB1P53999 RPL31-211ENST00000456292 357 ntTSL 23.84□□□□□ -1.799e-14■■■■□ 24.5
SUB1P53999 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.31e-14■■■■□ 24.5
SUB1P53999 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC10.71□□□□□ -0.691e-14■■■■□ 24.5
SUB1P53999 ALDH1A2-202ENST00000347587 3297 ntTSL 1 (best) BASIC8.58□□□□□ -1.041e-14■■■■□ 24.5
SUB1P53999 ALDH1A2-221ENST00000560312 3146 ntTSL 1 (best)7.2□□□□□ -1.261e-14■■■■□ 24.5
SUB1P53999 ALDH1A2-209ENST00000558384 466 ntTSL 33.42□□□□□ -1.861e-14■■■■□ 24.5
SUB1P53999 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.218e-8■■■■□ 24.5
SUB1P53999 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.14■□□□□ 0.178e-8■■■■□ 24.5
SUB1P53999 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.82□□□□□ -0.048e-8■■■■□ 24.5
SUB1P53999 SUMF2-209ENST00000436782 1683 ntTSL 1 (best)12.21□□□□□ -0.458e-8■■■■□ 24.5
SUB1P53999 SUMF2-207ENST00000423763 1792 ntTSL 211.72□□□□□ -0.538e-8■■■■□ 24.5
SUB1P53999 SUMF2-211ENST00000438133 1771 ntTSL 1 (best)10.51□□□□□ -0.738e-8■■■■□ 24.5
SUB1P53999 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.922e-7■■■■□ 24.5
SUB1P53999 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.152e-7■■■■□ 24.5
SUB1P53999 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.142e-7■■■■□ 24.5
SUB1P53999 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.872e-7■■■■□ 24.5
SUB1P53999 TXNDC5-202ENST00000460138 2704 ntTSL 28.43□□□□□ -1.062e-7■■■■□ 24.5
SUB1P53999 ADD2-210ENST00000456320 997 ntTSL 511.89□□□□□ -0.511e-6■■■■□ 24.5
SUB1P53999 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.751e-6■■■■□ 24.5
SUB1P53999 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.911e-6■■■■□ 24.5
SUB1P53999 ADD2-205ENST00000413157 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.041e-6■■■■□ 24.5
SUB1P53999 ADD2-203ENST00000403045 3745 ntTSL 27.68□□□□□ -1.181e-6■■■■□ 24.5
SUB1P53999 ADD2-214ENST00000522886 874 ntTSL 57.33□□□□□ -1.241e-6■■■■□ 24.5
SUB1P53999 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.251e-6■■■■□ 24.5
SUB1P53999 HNRNPR-213ENST00000641107 646 nt12.37□□□□□ -0.434e-8■■■■□ 24.4
SUB1P53999 HNRNPR-209ENST00000476660 1637 ntTSL 1 (best)11.55□□□□□ -0.564e-8■■■■□ 24.4
SUB1P53999 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.884e-8■■■■□ 24.4
SUB1P53999 HNRNPR-202ENST00000374612 2694 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.894e-8■■■■□ 24.4
SUB1P53999 HNRNPR-201ENST00000302271 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.924e-8■■■■□ 24.4
SUB1P53999 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.23□□□□□ -1.254e-8■■■■□ 24.4
SUB1P53999 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC7.6□□□□□ -1.195e-33■■■■□ 24.4
SUB1P53999 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.41e-7■■■■□ 24.4
SUB1P53999 MMS19-211ENST00000441194 916 ntTSL 513.95□□□□□ -0.184e-6■■■■□ 24.4
SUB1P53999 MMS19-210ENST00000439048 609 ntTSL 513.86□□□□□ -0.194e-6■■■■□ 24.4
SUB1P53999 MMS19-205ENST00000422685 877 ntAPPRIS ALT2 TSL 513.16□□□□□ -0.34e-6■■■■□ 24.4
SUB1P53999 MMS19-213ENST00000448660 776 ntTSL 513.16□□□□□ -0.34e-6■■■■□ 24.4
SUB1P53999 MMS19-208ENST00000437002 933 ntAPPRIS ALT2 TSL 512.85□□□□□ -0.354e-6■■■■□ 24.4
SUB1P53999 MRPL45-204ENST00000619548 1554 ntTSL 3 BASIC10.08□□□□□ -0.82e-6■■■■□ 24.4
SUB1P53999 MMS19-214ENST00000477575 986 ntTSL 28.47□□□□□ -1.054e-6■■■■□ 24.4
SUB1P53999 MMS19-217ENST00000483626 884 ntTSL 57.88□□□□□ -1.154e-6■■■■□ 24.4
SUB1P53999 MRPL45-203ENST00000613675 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.172e-6■■■■□ 24.4
SUB1P53999 SF3A3-206ENST00000487062 775 ntTSL 25.67□□□□□ -1.51e-13■■■■□ 24.4
SUB1P53999 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.185e-7■■■■□ 24.3
SUB1P53999 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.025e-7■■■■□ 24.3
SUB1P53999 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.285e-7■■■■□ 24.3
SUB1P53999 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.495e-7■■■■□ 24.3
SUB1P53999 UAP1-207ENST00000486089 1147 ntTSL 23.81□□□□□ -1.85e-7■■■■□ 24.3
SUB1P53999 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.742e-6■■■■□ 24.3
SUB1P53999 BAG6-243ENST00000434444 766 ntTSL 313.52□□□□□ -0.258e-8■■■■□ 24.3
SUB1P53999 BAG6-251ENST00000452994 880 ntTSL 312.8□□□□□ -0.368e-8■■■■□ 24.3
SUB1P53999 BAG6-254ENST00000456286 807 ntTSL 1 (best)10.02□□□□□ -0.818e-8■■■■□ 24.3
SUB1P53999 BAG6-253ENST00000454165 544 ntTSL 39.68□□□□□ -0.868e-8■■■■□ 24.3
Retrieved 100 of 11,644 protein–RNA pairs in 83 ms