Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THBS4P35443 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.42■□□□□ 0.54
THBS4P35443 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.42■□□□□ 0.54
THBS4P35443 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.42■□□□□ 0.54
THBS4P35443 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THBS4P35443 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.42■□□□□ 0.54
THBS4P35443 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.42■□□□□ 0.54
THBS4P35443 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS4P35443 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THBS4P35443 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS4P35443 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS4P35443 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS4P35443 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS4P35443 AC055733.4-201ENST00000638462 1354 ntBASIC18.42■□□□□ 0.54
THBS4P35443 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.41■□□□□ 0.54
THBS4P35443 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS4P35443 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS4P35443 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS4P35443 FEM1AP4-201ENST00000443167 1987 ntBASIC18.41■□□□□ 0.54
THBS4P35443 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.41■□□□□ 0.54
THBS4P35443 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.41■□□□□ 0.54
THBS4P35443 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.41■□□□□ 0.54
THBS4P35443 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS4P35443 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.41■□□□□ 0.54
THBS4P35443 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS4P35443 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.4■□□□□ 0.54
THBS4P35443 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.4■□□□□ 0.54
THBS4P35443 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS4P35443 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THBS4P35443 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THBS4P35443 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.4■□□□□ 0.54
THBS4P35443 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS4P35443 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.4■□□□□ 0.54
THBS4P35443 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.4■□□□□ 0.54
THBS4P35443 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS4P35443 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS4P35443 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
THBS4P35443 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THBS4P35443 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
THBS4P35443 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.39■□□□□ 0.53
THBS4P35443 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.39■□□□□ 0.53
THBS4P35443 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.39■□□□□ 0.53
THBS4P35443 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.39■□□□□ 0.53
THBS4P35443 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.39■□□□□ 0.53
THBS4P35443 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
THBS4P35443 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THBS4P35443 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.39■□□□□ 0.53
THBS4P35443 KRT87P-202ENST00000534226 1464 ntBASIC18.39■□□□□ 0.53
THBS4P35443 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.38■□□□□ 0.53
THBS4P35443 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.38■□□□□ 0.53
THBS4P35443 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.38■□□□□ 0.53
THBS4P35443 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.38■□□□□ 0.53
THBS4P35443 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.38■□□□□ 0.53
THBS4P35443 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS4P35443 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
THBS4P35443 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
THBS4P35443 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
THBS4P35443 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.37■□□□□ 0.53
THBS4P35443 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS4P35443 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS4P35443 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.37■□□□□ 0.53
THBS4P35443 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS4P35443 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS4P35443 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS4P35443 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS4P35443 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.37■□□□□ 0.53
THBS4P35443 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.37■□□□□ 0.53
THBS4P35443 KRT19P1-201ENST00000405746 1186 ntBASIC18.37■□□□□ 0.53
THBS4P35443 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.37■□□□□ 0.53
THBS4P35443 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
THBS4P35443 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.37■□□□□ 0.53
THBS4P35443 AL137784.2-201ENST00000607332 1000 ntBASIC18.37■□□□□ 0.53
THBS4P35443 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.37■□□□□ 0.53
THBS4P35443 AC092437.1-201ENST00000624794 1048 ntBASIC18.37■□□□□ 0.53
THBS4P35443 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS4P35443 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS4P35443 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS4P35443 AP006587.3-201ENST00000525742 1516 ntBASIC18.37■□□□□ 0.53
THBS4P35443 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms