Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
LCATP04180 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCATP04180 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCATP04180 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCATP04180 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCATP04180 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LCATP04180 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCATP04180 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCATP04180 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCATP04180 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.3■□□□□ 0.52
LCATP04180 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LCATP04180 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCATP04180 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCATP04180 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LCATP04180 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LCATP04180 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.29■□□□□ 0.52
LCATP04180 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCATP04180 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCATP04180 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.29■□□□□ 0.52
LCATP04180 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.29■□□□□ 0.52
LCATP04180 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.29■□□□□ 0.52
LCATP04180 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.29■□□□□ 0.52
LCATP04180 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCATP04180 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LCATP04180 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LCATP04180 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.28■□□□□ 0.52
LCATP04180 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.28■□□□□ 0.52
LCATP04180 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LCATP04180 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.28■□□□□ 0.52
LCATP04180 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.28■□□□□ 0.52
LCATP04180 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.28■□□□□ 0.52
LCATP04180 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCATP04180 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.27■□□□□ 0.52
LCATP04180 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LCATP04180 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
LCATP04180 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.27■□□□□ 0.52
LCATP04180 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LCATP04180 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCATP04180 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCATP04180 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.27■□□□□ 0.52
LCATP04180 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LCATP04180 AC027612.3-201ENST00000413684 1047 ntBASIC18.27■□□□□ 0.52
LCATP04180 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCATP04180 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCATP04180 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.27■□□□□ 0.52
LCATP04180 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LCATP04180 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
LCATP04180 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCATP04180 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCATP04180 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.26■□□□□ 0.51
LCATP04180 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.26■□□□□ 0.51
LCATP04180 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.26■□□□□ 0.51
LCATP04180 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 AC079140.4-201ENST00000507448 529 ntBASIC18.26■□□□□ 0.51
LCATP04180 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.26■□□□□ 0.51
LCATP04180 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.26■□□□□ 0.51
LCATP04180 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.26■□□□□ 0.51
LCATP04180 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.26■□□□□ 0.51
LCATP04180 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.26■□□□□ 0.51
LCATP04180 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.26■□□□□ 0.51
LCATP04180 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCATP04180 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCATP04180 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.25■□□□□ 0.51
LCATP04180 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.25■□□□□ 0.51
LCATP04180 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCATP04180 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.25■□□□□ 0.51
LCATP04180 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCATP04180 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.25■□□□□ 0.51
LCATP04180 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.25■□□□□ 0.51
LCATP04180 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
LCATP04180 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCATP04180 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCATP04180 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms