Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
UPK3AO75631 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.77■□□□□ 0.59
UPK3AO75631 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.76■□□□□ 0.59
UPK3AO75631 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 AC073130.3-201ENST00000624389 2278 ntBASIC18.76■□□□□ 0.59
UPK3AO75631 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UPK3AO75631 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.76■□□□□ 0.59
UPK3AO75631 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
UPK3AO75631 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.76■□□□□ 0.59
UPK3AO75631 AC034268.1-201ENST00000441047 882 ntBASIC18.76■□□□□ 0.59
UPK3AO75631 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.76■□□□□ 0.59
UPK3AO75631 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.76■□□□□ 0.59
UPK3AO75631 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
UPK3AO75631 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.76■□□□□ 0.59
UPK3AO75631 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK3AO75631 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.76■□□□□ 0.59
UPK3AO75631 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
UPK3AO75631 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK3AO75631 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK3AO75631 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
UPK3AO75631 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPK3AO75631 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.75■□□□□ 0.59
UPK3AO75631 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
UPK3AO75631 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPK3AO75631 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK3AO75631 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPK3AO75631 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK3AO75631 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK3AO75631 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.75■□□□□ 0.59
UPK3AO75631 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK3AO75631 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
UPK3AO75631 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK3AO75631 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK3AO75631 KRT87P-202ENST00000534226 1464 ntBASIC18.74■□□□□ 0.59
UPK3AO75631 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK3AO75631 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.74■□□□□ 0.59
UPK3AO75631 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.74■□□□□ 0.59
UPK3AO75631 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
UPK3AO75631 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
UPK3AO75631 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.74■□□□□ 0.59
UPK3AO75631 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UPK3AO75631 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK3AO75631 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK3AO75631 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK3AO75631 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK3AO75631 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK3AO75631 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
UPK3AO75631 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 AL157384.1-201ENST00000445995 2473 ntBASIC18.73■□□□□ 0.59
UPK3AO75631 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
UPK3AO75631 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.73■□□□□ 0.59
UPK3AO75631 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.73■□□□□ 0.59
UPK3AO75631 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.73■□□□□ 0.59
UPK3AO75631 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.73■□□□□ 0.59
UPK3AO75631 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK3AO75631 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.73■□□□□ 0.59
UPK3AO75631 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK3AO75631 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK3AO75631 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK3AO75631 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UPK3AO75631 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.72■□□□□ 0.59
UPK3AO75631 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK3AO75631 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK3AO75631 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPK3AO75631 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK3AO75631 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK3AO75631 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.72■□□□□ 0.59
UPK3AO75631 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK3AO75631 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK3AO75631 AC004854.2-201ENST00000608450 1441 ntBASIC18.72■□□□□ 0.59
UPK3AO75631 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK3AO75631 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK3AO75631 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK3AO75631 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
UPK3AO75631 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK3AO75631 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK3AO75631 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK3AO75631 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.71■□□□□ 0.59
UPK3AO75631 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK3AO75631 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.71■□□□□ 0.59
UPK3AO75631 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms