Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.18■□□□□ 0.82
GSC2O15499 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GSC2O15499 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GSC2O15499 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GSC2O15499 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
GSC2O15499 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
GSC2O15499 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
GSC2O15499 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GSC2O15499 AC099778.1-201ENST00000568593 1911 ntBASIC20.17■□□□□ 0.82
GSC2O15499 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
GSC2O15499 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.17■□□□□ 0.82
GSC2O15499 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
GSC2O15499 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GSC2O15499 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 KRT18P60-201ENST00000312876 1297 ntBASIC20.17■□□□□ 0.82
GSC2O15499 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.17■□□□□ 0.82
GSC2O15499 HSD17B1P1-201ENST00000590052 955 ntBASIC20.17■□□□□ 0.82
GSC2O15499 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
GSC2O15499 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.17■□□□□ 0.82
GSC2O15499 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GSC2O15499 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSC2O15499 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSC2O15499 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.16■□□□□ 0.82
GSC2O15499 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSC2O15499 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GSC2O15499 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.16■□□□□ 0.82
GSC2O15499 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GSC2O15499 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.16■□□□□ 0.82
GSC2O15499 PVT1_1.1-201ENST00000615125 194 ntBASIC20.16■□□□□ 0.82
GSC2O15499 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSC2O15499 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSC2O15499 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSC2O15499 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSC2O15499 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.16■□□□□ 0.82
GSC2O15499 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
GSC2O15499 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSC2O15499 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
GSC2O15499 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
GSC2O15499 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
GSC2O15499 AC116562.4-201ENST00000641316 2276 ntBASIC20.15■□□□□ 0.82
GSC2O15499 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GSC2O15499 AC121338.2-201ENST00000622535 1744 ntBASIC20.15■□□□□ 0.82
GSC2O15499 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.15■□□□□ 0.82
GSC2O15499 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GSC2O15499 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GSC2O15499 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
GSC2O15499 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GSC2O15499 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.15■□□□□ 0.82
GSC2O15499 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
GSC2O15499 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GSC2O15499 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GSC2O15499 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GSC2O15499 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.14■□□□□ 0.81
GSC2O15499 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.14■□□□□ 0.81
GSC2O15499 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
GSC2O15499 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
GSC2O15499 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GSC2O15499 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GSC2O15499 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GSC2O15499 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.14■□□□□ 0.81
GSC2O15499 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.14■□□□□ 0.81
GSC2O15499 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GSC2O15499 DUX4L18-201ENST00000553347 1267 ntBASIC20.14■□□□□ 0.81
GSC2O15499 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.14■□□□□ 0.81
GSC2O15499 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GSC2O15499 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
GSC2O15499 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GSC2O15499 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.14■□□□□ 0.81
GSC2O15499 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSC2O15499 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.13■□□□□ 0.81
GSC2O15499 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSC2O15499 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSC2O15499 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSC2O15499 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.13■□□□□ 0.81
GSC2O15499 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GSC2O15499 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSC2O15499 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.13■□□□□ 0.81
GSC2O15499 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSC2O15499 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.13■□□□□ 0.81
GSC2O15499 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSC2O15499 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.13■□□□□ 0.81
GSC2O15499 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSC2O15499 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GSC2O15499 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GSC2O15499 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
GSC2O15499 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GSC2O15499 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms