Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.3□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 AC006128.1-201ENST00000624704 1661 ntBASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM256-PLSCR3K7ERE1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 CR559946.2-201ENST00000623684 991 ntBASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms