Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 AC027702.1-201ENST00000563810 1770 ntBASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SMIM1B2RUZ4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 RNF165-205ENST00000588679 2904 ntBASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 TSPY9P-201ENST00000440215 945 ntBASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 TSPY11P-201ENST00000442607 1045 ntBASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.17□□□□□ -0.14
SMIM1B2RUZ4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMIM1B2RUZ4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 AC020907.5-201ENST00000624372 1936 ntBASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 AP006587.3-201ENST00000525742 1516 ntBASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM1B2RUZ4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 AC099791.2-201ENST00000605725 427 ntBASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 MIR6724-1-201ENST00000616420 92 ntBASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 MIR6724-2-201ENST00000616483 92 ntBASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 MIR6724-4-201ENST00000617390 92 ntBASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 MIR6724-3-201ENST00000622482 92 ntBASIC14.14□□□□□ -0.15
SMIM1B2RUZ4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms