Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 AL049796.1-201ENST00000565336 1766 ntBASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 AC008764.7-201ENST00000593779 1081 ntBASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV30A0A087WSZ9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV30A0A087WSZ9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 EDA-201ENST00000338901 1233 ntBASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 PBX2P1-201ENST00000493219 1291 ntBASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 AC105233.4-201ENST00000642045 216 ntBASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV30A0A087WSZ9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV30A0A087WSZ9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV30A0A087WSZ9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV30A0A087WSZ9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 AC099791.1-201ENST00000416440 715 ntBASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV30A0A087WSZ9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV30A0A087WSZ9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms