Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.7■■■□□ 2.67
DDX49Q9Y6V7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
DDX49Q9Y6V7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.69■■■□□ 2.66
DDX49Q9Y6V7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.69■■■□□ 2.66
DDX49Q9Y6V7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.68■■■□□ 2.66
DDX49Q9Y6V7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.67■■■□□ 2.66
DDX49Q9Y6V7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
DDX49Q9Y6V7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
DDX49Q9Y6V7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
DDX49Q9Y6V7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
DDX49Q9Y6V7 AL162393.1-201ENST00000437852 946 ntBASIC31.63■■■□□ 2.65
DDX49Q9Y6V7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
DDX49Q9Y6V7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
DDX49Q9Y6V7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
DDX49Q9Y6V7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
DDX49Q9Y6V7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
DDX49Q9Y6V7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.6■■■□□ 2.65
DDX49Q9Y6V7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
DDX49Q9Y6V7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
DDX49Q9Y6V7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
DDX49Q9Y6V7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
DDX49Q9Y6V7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
DDX49Q9Y6V7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.58■■■□□ 2.65
DDX49Q9Y6V7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.57■■■□□ 2.64
DDX49Q9Y6V7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
DDX49Q9Y6V7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.56■■■□□ 2.64
DDX49Q9Y6V7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.55■■■□□ 2.64
DDX49Q9Y6V7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
DDX49Q9Y6V7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
DDX49Q9Y6V7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
DDX49Q9Y6V7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.53■■■□□ 2.64
DDX49Q9Y6V7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.53■■■□□ 2.64
DDX49Q9Y6V7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
DDX49Q9Y6V7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
DDX49Q9Y6V7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
DDX49Q9Y6V7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.51■■■□□ 2.63
DDX49Q9Y6V7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
DDX49Q9Y6V7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
DDX49Q9Y6V7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
DDX49Q9Y6V7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
DDX49Q9Y6V7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
DDX49Q9Y6V7 AL161658.1-201ENST00000623641 1967 ntBASIC31.45■■■□□ 2.63
DDX49Q9Y6V7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
DDX49Q9Y6V7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
DDX49Q9Y6V7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.45■■■□□ 2.63
DDX49Q9Y6V7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
DDX49Q9Y6V7 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.43■■■□□ 2.62
DDX49Q9Y6V7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
DDX49Q9Y6V7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.41■■■□□ 2.62
DDX49Q9Y6V7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
DDX49Q9Y6V7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
DDX49Q9Y6V7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
DDX49Q9Y6V7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
DDX49Q9Y6V7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
DDX49Q9Y6V7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
DDX49Q9Y6V7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
DDX49Q9Y6V7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
DDX49Q9Y6V7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 AP006261.1-201ENST00000584783 668 ntBASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
DDX49Q9Y6V7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
DDX49Q9Y6V7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
DDX49Q9Y6V7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.36■■■□□ 2.61
DDX49Q9Y6V7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.35■■■□□ 2.61
DDX49Q9Y6V7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DDX49Q9Y6V7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DDX49Q9Y6V7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.32■■■□□ 2.6
DDX49Q9Y6V7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
DDX49Q9Y6V7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
DDX49Q9Y6V7 DUX4L28-201ENST00000623687 678 ntBASIC31.3■■■□□ 2.6
DDX49Q9Y6V7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
DDX49Q9Y6V7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
DDX49Q9Y6V7 MIR762-201ENST00000390236 83 ntBASIC31.27■■■□□ 2.6
DDX49Q9Y6V7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
DDX49Q9Y6V7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
DDX49Q9Y6V7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
DDX49Q9Y6V7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
DDX49Q9Y6V7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
DDX49Q9Y6V7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
DDX49Q9Y6V7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
DDX49Q9Y6V7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
DDX49Q9Y6V7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
DDX49Q9Y6V7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
DDX49Q9Y6V7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
DDX49Q9Y6V7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.21■■■□□ 2.59
DDX49Q9Y6V7 AC087741.3-201ENST00000624270 1347 ntBASIC31.21■■■□□ 2.59
DDX49Q9Y6V7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.2■■■□□ 2.59
DDX49Q9Y6V7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
DDX49Q9Y6V7 ST7-AS1-201ENST00000456775 1889 ntBASIC31.2■■■□□ 2.58
DDX49Q9Y6V7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms