Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPH3ALQ9UNE2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPH3ALQ9UNE2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPH3ALQ9UNE2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPH3ALQ9UNE2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPH3ALQ9UNE2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RPH3ALQ9UNE2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
RPH3ALQ9UNE2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPH3ALQ9UNE2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPH3ALQ9UNE2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.5■□□□□ 0.87
RPH3ALQ9UNE2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.5■□□□□ 0.87
RPH3ALQ9UNE2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RPH3ALQ9UNE2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPH3ALQ9UNE2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3ALQ9UNE2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3ALQ9UNE2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3ALQ9UNE2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPH3ALQ9UNE2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPH3ALQ9UNE2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPH3ALQ9UNE2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.48■□□□□ 0.87
RPH3ALQ9UNE2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RPH3ALQ9UNE2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
RPH3ALQ9UNE2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPH3ALQ9UNE2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPH3ALQ9UNE2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RPH3ALQ9UNE2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.46■□□□□ 0.87
RPH3ALQ9UNE2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RPH3ALQ9UNE2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.45■□□□□ 0.86
RPH3ALQ9UNE2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RPH3ALQ9UNE2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPH3ALQ9UNE2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPH3ALQ9UNE2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPH3ALQ9UNE2 ST7-AS1-201ENST00000456775 1889 ntBASIC20.45■□□□□ 0.86
RPH3ALQ9UNE2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPH3ALQ9UNE2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.42■□□□□ 0.86
RPH3ALQ9UNE2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPH3ALQ9UNE2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.42■□□□□ 0.86
RPH3ALQ9UNE2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPH3ALQ9UNE2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPH3ALQ9UNE2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPH3ALQ9UNE2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPH3ALQ9UNE2 AC006077.2-201ENST00000623591 457 ntBASIC20.41■□□□□ 0.86
RPH3ALQ9UNE2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RPH3ALQ9UNE2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPH3ALQ9UNE2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPH3ALQ9UNE2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPH3ALQ9UNE2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.39■□□□□ 0.85
RPH3ALQ9UNE2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPH3ALQ9UNE2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.39■□□□□ 0.85
RPH3ALQ9UNE2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.39■□□□□ 0.85
RPH3ALQ9UNE2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.39■□□□□ 0.85
RPH3ALQ9UNE2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPH3ALQ9UNE2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPH3ALQ9UNE2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPH3ALQ9UNE2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPH3ALQ9UNE2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPH3ALQ9UNE2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPH3ALQ9UNE2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.37■□□□□ 0.85
RPH3ALQ9UNE2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPH3ALQ9UNE2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPH3ALQ9UNE2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPH3ALQ9UNE2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RPH3ALQ9UNE2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RPH3ALQ9UNE2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPH3ALQ9UNE2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPH3ALQ9UNE2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPH3ALQ9UNE2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPH3ALQ9UNE2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPH3ALQ9UNE2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RPH3ALQ9UNE2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPH3ALQ9UNE2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPH3ALQ9UNE2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPH3ALQ9UNE2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RPH3ALQ9UNE2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPH3ALQ9UNE2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
RPH3ALQ9UNE2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPH3ALQ9UNE2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPH3ALQ9UNE2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPH3ALQ9UNE2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPH3ALQ9UNE2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPH3ALQ9UNE2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPH3ALQ9UNE2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPH3ALQ9UNE2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPH3ALQ9UNE2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPH3ALQ9UNE2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RPH3ALQ9UNE2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPH3ALQ9UNE2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RPH3ALQ9UNE2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.27■□□□□ 0.84
RPH3ALQ9UNE2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPH3ALQ9UNE2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPH3ALQ9UNE2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPH3ALQ9UNE2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPH3ALQ9UNE2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RPH3ALQ9UNE2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3ALQ9UNE2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RPH3ALQ9UNE2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3ALQ9UNE2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3ALQ9UNE2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.26■□□□□ 0.83
RPH3ALQ9UNE2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPH3ALQ9UNE2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms