Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDH23Q9H251 ABHD17AP5-201ENST00000580133 923 ntBASIC29.22■■■□□ 2.27
CDH23Q9H251 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.21■■■□□ 2.27
CDH23Q9H251 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDH23Q9H251 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CDH23Q9H251 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
CDH23Q9H251 DUX4L11-201ENST00000611504 1267 ntBASIC29.18■■■□□ 2.26
CDH23Q9H251 DUX4L12-201ENST00000614593 1267 ntBASIC29.18■■■□□ 2.26
CDH23Q9H251 DUX4L14-201ENST00000621227 1267 ntBASIC29.18■■■□□ 2.26
CDH23Q9H251 MIR6090-201ENST00000622481 60 ntBASIC29.18■■■□□ 2.26
CDH23Q9H251 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDH23Q9H251 WASH5P-204ENST00000632292 975 ntBASIC29.17■■■□□ 2.26
CDH23Q9H251 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDH23Q9H251 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CDH23Q9H251 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CDH23Q9H251 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDH23Q9H251 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDH23Q9H251 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.16■■■□□ 2.26
CDH23Q9H251 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.16■■■□□ 2.26
CDH23Q9H251 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDH23Q9H251 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDH23Q9H251 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
CDH23Q9H251 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CDH23Q9H251 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
CDH23Q9H251 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CDH23Q9H251 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.12■■■□□ 2.25
CDH23Q9H251 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.12■■■□□ 2.25
CDH23Q9H251 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDH23Q9H251 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.11■■■□□ 2.25
CDH23Q9H251 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDH23Q9H251 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.11■■■□□ 2.25
CDH23Q9H251 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.09■■■□□ 2.25
CDH23Q9H251 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDH23Q9H251 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDH23Q9H251 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDH23Q9H251 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CDH23Q9H251 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.06■■■□□ 2.24
CDH23Q9H251 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.05■■■□□ 2.24
CDH23Q9H251 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.05■■■□□ 2.24
CDH23Q9H251 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDH23Q9H251 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDH23Q9H251 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
CDH23Q9H251 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
CDH23Q9H251 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CDH23Q9H251 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDH23Q9H251 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDH23Q9H251 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDH23Q9H251 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.98■■■□□ 2.23
CDH23Q9H251 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDH23Q9H251 DUX4L13-201ENST00000554103 1267 ntBASIC28.97■■■□□ 2.23
CDH23Q9H251 DUX4L15-201ENST00000611059 1267 ntBASIC28.97■■■□□ 2.23
CDH23Q9H251 DUX4L23-201ENST00000615195 1269 ntBASIC28.97■■■□□ 2.23
CDH23Q9H251 DUX4L24-201ENST00000617576 1269 ntBASIC28.97■■■□□ 2.23
CDH23Q9H251 DUX4L22-201ENST00000618238 1269 ntBASIC28.97■■■□□ 2.23
CDH23Q9H251 DUX4L20-201ENST00000619712 1269 ntBASIC28.97■■■□□ 2.23
CDH23Q9H251 DUX4L21-201ENST00000622058 1269 ntBASIC28.97■■■□□ 2.23
CDH23Q9H251 DUX4L10-201ENST00000622460 1267 ntBASIC28.97■■■□□ 2.23
CDH23Q9H251 DUX4L25-201ENST00000624915 1269 ntBASIC28.97■■■□□ 2.23
CDH23Q9H251 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
CDH23Q9H251 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.97■■■□□ 2.23
CDH23Q9H251 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.97■■■□□ 2.23
CDH23Q9H251 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.97■■■□□ 2.23
CDH23Q9H251 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CDH23Q9H251 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.96■■■□□ 2.23
CDH23Q9H251 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.96■■■□□ 2.23
CDH23Q9H251 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CDH23Q9H251 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CDH23Q9H251 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDH23Q9H251 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDH23Q9H251 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDH23Q9H251 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CDH23Q9H251 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.92■■■□□ 2.22
CDH23Q9H251 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.91■■■□□ 2.22
CDH23Q9H251 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CDH23Q9H251 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDH23Q9H251 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CDH23Q9H251 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CDH23Q9H251 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CDH23Q9H251 RNF126P1-201ENST00000567452 1320 ntBASIC28.89■■■□□ 2.21
CDH23Q9H251 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.89■■■□□ 2.21
CDH23Q9H251 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CDH23Q9H251 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.86■■■□□ 2.21
CDH23Q9H251 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDH23Q9H251 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDH23Q9H251 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDH23Q9H251 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
CDH23Q9H251 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CDH23Q9H251 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CDH23Q9H251 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.82■■■□□ 2.2
CDH23Q9H251 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.82■■■□□ 2.2
CDH23Q9H251 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.82■■■□□ 2.2
CDH23Q9H251 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDH23Q9H251 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.81■■■□□ 2.2
CDH23Q9H251 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDH23Q9H251 AC108673.1-201ENST00000510422 1159 ntBASIC28.8■■■□□ 2.2
CDH23Q9H251 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
CDH23Q9H251 GPX1-201ENST00000419349 1106 ntBASIC28.79■■■□□ 2.2
CDH23Q9H251 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CDH23Q9H251 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.78■■■□□ 2.2
CDH23Q9H251 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms