Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC9.14□□□□□ -0.95
KRTAP4-3Q9BYR4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-3Q9BYR4 MIR7108-201ENST00000614319 87 ntBASIC9.14□□□□□ -0.95
KRTAP4-3Q9BYR4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-3Q9BYR4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-3Q9BYR4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
KRTAP4-3Q9BYR4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP4-3Q9BYR4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP4-3Q9BYR4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC9.13□□□□□ -0.95
KRTAP4-3Q9BYR4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP4-3Q9BYR4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC9.13□□□□□ -0.95
KRTAP4-3Q9BYR4 AC044849.2-201ENST00000606596 710 ntBASIC9.13□□□□□ -0.95
KRTAP4-3Q9BYR4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP4-3Q9BYR4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-3Q9BYR4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-3Q9BYR4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP4-3Q9BYR4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC9.12□□□□□ -0.95
KRTAP4-3Q9BYR4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC9.12□□□□□ -0.95
KRTAP4-3Q9BYR4 MIR6090-201ENST00000622481 60 ntBASIC9.12□□□□□ -0.95
KRTAP4-3Q9BYR4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-3Q9BYR4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-3Q9BYR4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-3Q9BYR4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-3Q9BYR4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-3Q9BYR4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-3Q9BYR4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-3Q9BYR4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-3Q9BYR4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
KRTAP4-3Q9BYR4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
KRTAP4-3Q9BYR4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
KRTAP4-3Q9BYR4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC9.09□□□□□ -0.95
KRTAP4-3Q9BYR4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC9.09□□□□□ -0.95
KRTAP4-3Q9BYR4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC9.09□□□□□ -0.95
KRTAP4-3Q9BYR4 ZNRF2P2-203ENST00000454624 420 ntBASIC9.09□□□□□ -0.95
KRTAP4-3Q9BYR4 AC021231.2-201ENST00000594613 730 ntBASIC9.09□□□□□ -0.95
KRTAP4-3Q9BYR4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP4-3Q9BYR4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-3Q9BYR4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-3Q9BYR4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-3Q9BYR4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-3Q9BYR4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC9.08□□□□□ -0.96
KRTAP4-3Q9BYR4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-3Q9BYR4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-3Q9BYR4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-3Q9BYR4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC9.07□□□□□ -0.96
KRTAP4-3Q9BYR4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP4-3Q9BYR4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-3Q9BYR4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP4-3Q9BYR4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-3Q9BYR4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP4-3Q9BYR4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP4-3Q9BYR4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
KRTAP4-3Q9BYR4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP4-3Q9BYR4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP4-3Q9BYR4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP4-3Q9BYR4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP4-3Q9BYR4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
KRTAP4-3Q9BYR4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP4-3Q9BYR4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP4-3Q9BYR4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP4-3Q9BYR4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC9.05□□□□□ -0.96
KRTAP4-3Q9BYR4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP4-3Q9BYR4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP4-3Q9BYR4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP4-3Q9BYR4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP4-3Q9BYR4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP4-3Q9BYR4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP4-3Q9BYR4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP4-3Q9BYR4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
KRTAP4-3Q9BYR4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 DUX4L29-201ENST00000425409 679 ntBASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
KRTAP4-3Q9BYR4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
KRTAP4-3Q9BYR4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
KRTAP4-3Q9BYR4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC9.02□□□□□ -0.97
KRTAP4-3Q9BYR4 HLA-V-202ENST00000446817 847 ntBASIC9.02□□□□□ -0.97
KRTAP4-3Q9BYR4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC9.02□□□□□ -0.97
KRTAP4-3Q9BYR4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC9.02□□□□□ -0.97
KRTAP4-3Q9BYR4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
KRTAP4-3Q9BYR4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
KRTAP4-3Q9BYR4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms