Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP1S3Q96PC3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S3Q96PC3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.92■□□□□ 0.78
AP1S3Q96PC3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
AP1S3Q96PC3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S3Q96PC3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S3Q96PC3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
AP1S3Q96PC3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S3Q96PC3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.92■□□□□ 0.78
AP1S3Q96PC3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S3Q96PC3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP1S3Q96PC3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP1S3Q96PC3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.91■□□□□ 0.78
AP1S3Q96PC3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.91■□□□□ 0.78
AP1S3Q96PC3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S3Q96PC3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
AP1S3Q96PC3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP1S3Q96PC3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.89■□□□□ 0.77
AP1S3Q96PC3 ABCB10P1-201ENST00000614297 2181 ntBASIC19.89■□□□□ 0.77
AP1S3Q96PC3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.88■□□□□ 0.77
AP1S3Q96PC3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S3Q96PC3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S3Q96PC3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S3Q96PC3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S3Q96PC3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.88■□□□□ 0.77
AP1S3Q96PC3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S3Q96PC3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.87■□□□□ 0.77
AP1S3Q96PC3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.86■□□□□ 0.77
AP1S3Q96PC3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP1S3Q96PC3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
AP1S3Q96PC3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S3Q96PC3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S3Q96PC3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S3Q96PC3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S3Q96PC3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP1S3Q96PC3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP1S3Q96PC3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S3Q96PC3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
AP1S3Q96PC3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S3Q96PC3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S3Q96PC3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S3Q96PC3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S3Q96PC3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
AP1S3Q96PC3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
AP1S3Q96PC3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S3Q96PC3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S3Q96PC3 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.78■□□□□ 0.76
AP1S3Q96PC3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S3Q96PC3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S3Q96PC3 AC135731.1-201ENST00000569415 2548 ntBASIC19.77■□□□□ 0.76
AP1S3Q96PC3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S3Q96PC3 ABCB10P3-201ENST00000561950 2166 ntBASIC19.76■□□□□ 0.75
AP1S3Q96PC3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S3Q96PC3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S3Q96PC3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
AP1S3Q96PC3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S3Q96PC3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S3Q96PC3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.75■□□□□ 0.75
AP1S3Q96PC3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.74■□□□□ 0.75
AP1S3Q96PC3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S3Q96PC3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S3Q96PC3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S3Q96PC3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.74■□□□□ 0.75
AP1S3Q96PC3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.73■□□□□ 0.75
AP1S3Q96PC3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S3Q96PC3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
AP1S3Q96PC3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S3Q96PC3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S3Q96PC3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S3Q96PC3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP1S3Q96PC3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP1S3Q96PC3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP1S3Q96PC3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.7■□□□□ 0.74
AP1S3Q96PC3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP1S3Q96PC3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP1S3Q96PC3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S3Q96PC3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S3Q96PC3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S3Q96PC3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S3Q96PC3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S3Q96PC3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
AP1S3Q96PC3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
AP1S3Q96PC3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S3Q96PC3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
AP1S3Q96PC3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S3Q96PC3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S3Q96PC3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S3Q96PC3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.67■□□□□ 0.74
AP1S3Q96PC3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S3Q96PC3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
AP1S3Q96PC3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
AP1S3Q96PC3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S3Q96PC3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
AP1S3Q96PC3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S3Q96PC3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
AP1S3Q96PC3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
AP1S3Q96PC3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S3Q96PC3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
AP1S3Q96PC3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S3Q96PC3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms