Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 HSD17B1P1-201ENST00000590052 955 ntBASIC33.27■■■□□ 2.92
SNED1Q8TER0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
SNED1Q8TER0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC33.26■■■□□ 2.92
SNED1Q8TER0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC33.26■■■□□ 2.92
SNED1Q8TER0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
SNED1Q8TER0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC33.26■■■□□ 2.91
SNED1Q8TER0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC33.26■■■□□ 2.91
SNED1Q8TER0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC33.25■■■□□ 2.91
SNED1Q8TER0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC33.24■■■□□ 2.91
SNED1Q8TER0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
SNED1Q8TER0 AC108673.1-201ENST00000510422 1159 ntBASIC33.24■■■□□ 2.91
SNED1Q8TER0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC33.23■■■□□ 2.91
SNED1Q8TER0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
SNED1Q8TER0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC33.21■■■□□ 2.91
SNED1Q8TER0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SNED1Q8TER0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC33.2■■■□□ 2.91
SNED1Q8TER0 LINC01971-201ENST00000617888 1048 ntBASIC33.2■■■□□ 2.91
SNED1Q8TER0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
SNED1Q8TER0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.91
SNED1Q8TER0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
SNED1Q8TER0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
SNED1Q8TER0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.91
SNED1Q8TER0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
SNED1Q8TER0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC33.19■■■□□ 2.9
SNED1Q8TER0 DUX4L11-201ENST00000611504 1267 ntBASIC33.19■■■□□ 2.9
SNED1Q8TER0 DUX4L12-201ENST00000614593 1267 ntBASIC33.19■■■□□ 2.9
SNED1Q8TER0 DUX4L14-201ENST00000621227 1267 ntBASIC33.19■■■□□ 2.9
SNED1Q8TER0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33.19■■■□□ 2.9
SNED1Q8TER0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC33.18■■■□□ 2.9
SNED1Q8TER0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SNED1Q8TER0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SNED1Q8TER0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC33.16■■■□□ 2.9
SNED1Q8TER0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.16■■■□□ 2.9
SNED1Q8TER0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
SNED1Q8TER0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC33.15■■■□□ 2.9
SNED1Q8TER0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
SNED1Q8TER0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC33.13■■■□□ 2.89
SNED1Q8TER0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.13■■■□□ 2.89
SNED1Q8TER0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC33.12■■■□□ 2.89
SNED1Q8TER0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SNED1Q8TER0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC33.11■■■□□ 2.89
SNED1Q8TER0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
SNED1Q8TER0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
SNED1Q8TER0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SNED1Q8TER0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SNED1Q8TER0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
SNED1Q8TER0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC33.07■■■□□ 2.88
SNED1Q8TER0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
SNED1Q8TER0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
SNED1Q8TER0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
SNED1Q8TER0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
SNED1Q8TER0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SNED1Q8TER0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SNED1Q8TER0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SNED1Q8TER0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
SNED1Q8TER0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC33.02■■■□□ 2.88
SNED1Q8TER0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SNED1Q8TER0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SNED1Q8TER0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SNED1Q8TER0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.99■■■□□ 2.87
SNED1Q8TER0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.99■■■□□ 2.87
SNED1Q8TER0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
SNED1Q8TER0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
SNED1Q8TER0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.97■■■□□ 2.87
SNED1Q8TER0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
SNED1Q8TER0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
SNED1Q8TER0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
SNED1Q8TER0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SNED1Q8TER0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
SNED1Q8TER0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.93■■■□□ 2.86
SNED1Q8TER0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.92■■■□□ 2.86
SNED1Q8TER0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
SNED1Q8TER0 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.91■■■□□ 2.86
SNED1Q8TER0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.91■■■□□ 2.86
SNED1Q8TER0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.9■■■□□ 2.86
SNED1Q8TER0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SNED1Q8TER0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
SNED1Q8TER0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.88■■■□□ 2.85
SNED1Q8TER0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SNED1Q8TER0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.87■■■□□ 2.85
SNED1Q8TER0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.85■■■□□ 2.85
SNED1Q8TER0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
SNED1Q8TER0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.85■■■□□ 2.85
SNED1Q8TER0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SNED1Q8TER0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.85■■■□□ 2.85
SNED1Q8TER0 DUX4L13-201ENST00000554103 1267 ntBASIC32.84■■■□□ 2.85
SNED1Q8TER0 DUX4L15-201ENST00000611059 1267 ntBASIC32.84■■■□□ 2.85
SNED1Q8TER0 DUX4L23-201ENST00000615195 1269 ntBASIC32.84■■■□□ 2.85
SNED1Q8TER0 DUX4L24-201ENST00000617576 1269 ntBASIC32.84■■■□□ 2.85
SNED1Q8TER0 DUX4L22-201ENST00000618238 1269 ntBASIC32.84■■■□□ 2.85
SNED1Q8TER0 DUX4L20-201ENST00000619712 1269 ntBASIC32.84■■■□□ 2.85
SNED1Q8TER0 DUX4L21-201ENST00000622058 1269 ntBASIC32.84■■■□□ 2.85
SNED1Q8TER0 DUX4L10-201ENST00000622460 1267 ntBASIC32.84■■■□□ 2.85
SNED1Q8TER0 DUX4L25-201ENST00000624915 1269 ntBASIC32.84■■■□□ 2.85
SNED1Q8TER0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNED1Q8TER0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNED1Q8TER0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNED1Q8TER0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.82■■■□□ 2.85
SNED1Q8TER0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SNED1Q8TER0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.81■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms