Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
SSH3Q8TE77 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
SSH3Q8TE77 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
SSH3Q8TE77 HNRNPLP2-201ENST00000568980 1570 ntBASIC33.29■■■□□ 2.92
SSH3Q8TE77 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SSH3Q8TE77 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
SSH3Q8TE77 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
SSH3Q8TE77 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC33.28■■■□□ 2.92
SSH3Q8TE77 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SSH3Q8TE77 CHML-205ENST00000638160 705 ntTSL 3 BASIC33.26■■■□□ 2.91
SSH3Q8TE77 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
SSH3Q8TE77 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
SSH3Q8TE77 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
SSH3Q8TE77 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.24■■■□□ 2.91
SSH3Q8TE77 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC33.24■■■□□ 2.91
SSH3Q8TE77 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
SSH3Q8TE77 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC33.23■■■□□ 2.91
SSH3Q8TE77 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
SSH3Q8TE77 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC33.22■■■□□ 2.91
SSH3Q8TE77 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
SSH3Q8TE77 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
SSH3Q8TE77 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC33.2■■■□□ 2.91
SSH3Q8TE77 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC33.19■■■□□ 2.9
SSH3Q8TE77 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SSH3Q8TE77 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC33.17■■■□□ 2.9
SSH3Q8TE77 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
SSH3Q8TE77 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SSH3Q8TE77 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
SSH3Q8TE77 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC33.17■■■□□ 2.9
SSH3Q8TE77 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
SSH3Q8TE77 NRG1-221ENST00000614767 762 ntTSL 5 BASIC33.16■■■□□ 2.9
SSH3Q8TE77 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC33.15■■■□□ 2.9
SSH3Q8TE77 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SSH3Q8TE77 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC33.13■■■□□ 2.89
SSH3Q8TE77 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC33.12■■■□□ 2.89
SSH3Q8TE77 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
SSH3Q8TE77 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33.11■■■□□ 2.89
SSH3Q8TE77 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC33.11■■■□□ 2.89
SSH3Q8TE77 AP006261.1-201ENST00000584783 668 ntBASIC33.11■■■□□ 2.89
SSH3Q8TE77 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SSH3Q8TE77 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
SSH3Q8TE77 AC005559.1-201ENST00000589661 871 ntBASIC33.1■■■□□ 2.89
SSH3Q8TE77 DUX4L28-201ENST00000623687 678 ntBASIC33.1■■■□□ 2.89
SSH3Q8TE77 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
SSH3Q8TE77 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SSH3Q8TE77 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
SSH3Q8TE77 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC33.09■■■□□ 2.89
SSH3Q8TE77 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC33.08■■■□□ 2.89
SSH3Q8TE77 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
SSH3Q8TE77 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SSH3Q8TE77 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
SSH3Q8TE77 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
SSH3Q8TE77 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
SSH3Q8TE77 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
SSH3Q8TE77 AL162393.1-201ENST00000437852 946 ntBASIC33.06■■■□□ 2.88
SSH3Q8TE77 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SSH3Q8TE77 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC33.04■■■□□ 2.88
SSH3Q8TE77 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SSH3Q8TE77 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SSH3Q8TE77 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC33.02■■■□□ 2.88
SSH3Q8TE77 MIR3665-201ENST00000578708 105 ntBASIC33.02■■■□□ 2.88
SSH3Q8TE77 AL135925.1-201ENST00000605920 1701 ntBASIC33■■■□□ 2.87
SSH3Q8TE77 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC33■■■□□ 2.87
SSH3Q8TE77 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
SSH3Q8TE77 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.98■■■□□ 2.87
SSH3Q8TE77 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
SSH3Q8TE77 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
SSH3Q8TE77 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.96■■■□□ 2.87
SSH3Q8TE77 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
SSH3Q8TE77 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.95■■■□□ 2.87
SSH3Q8TE77 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.95■■■□□ 2.86
SSH3Q8TE77 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.93■■■□□ 2.86
SSH3Q8TE77 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.92■■■□□ 2.86
SSH3Q8TE77 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.92■■■□□ 2.86
SSH3Q8TE77 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.92■■■□□ 2.86
SSH3Q8TE77 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SSH3Q8TE77 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.91■■■□□ 2.86
SSH3Q8TE77 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.91■■■□□ 2.86
SSH3Q8TE77 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.91■■■□□ 2.86
SSH3Q8TE77 AC087741.3-201ENST00000624270 1347 ntBASIC32.91■■■□□ 2.86
SSH3Q8TE77 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SSH3Q8TE77 ST7-AS1-201ENST00000456775 1889 ntBASIC32.89■■■□□ 2.86
SSH3Q8TE77 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SSH3Q8TE77 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SSH3Q8TE77 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.88■■■□□ 2.85
SSH3Q8TE77 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SSH3Q8TE77 AC010864.1-201ENST00000609407 1511 ntBASIC32.87■■■□□ 2.85
SSH3Q8TE77 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
SSH3Q8TE77 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
SSH3Q8TE77 RPS2P35-201ENST00000443417 897 ntBASIC32.86■■■□□ 2.85
SSH3Q8TE77 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
SSH3Q8TE77 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
SSH3Q8TE77 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SSH3Q8TE77 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.85■■■□□ 2.85
SSH3Q8TE77 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SSH3Q8TE77 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.84■■■□□ 2.85
SSH3Q8TE77 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
SSH3Q8TE77 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SSH3Q8TE77 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SSH3Q8TE77 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.83■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms