Protein–RNA interactions for Protein: Q8N7A1

KLHDC1, Kelch domain-containing protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1Q8N7A1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.28■■□□□ 1
KLHDC1Q8N7A1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KLHDC1Q8N7A1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KLHDC1Q8N7A1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.28■■□□□ 1
KLHDC1Q8N7A1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.27■■□□□ 1
KLHDC1Q8N7A1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.27■■□□□ 1
KLHDC1Q8N7A1 MIR7108-201ENST00000614319 87 ntBASIC21.27■■□□□ 1
KLHDC1Q8N7A1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
KLHDC1Q8N7A1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KLHDC1Q8N7A1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KLHDC1Q8N7A1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.25■□□□□ 0.99
KLHDC1Q8N7A1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KLHDC1Q8N7A1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KLHDC1Q8N7A1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
KLHDC1Q8N7A1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KLHDC1Q8N7A1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KLHDC1Q8N7A1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KLHDC1Q8N7A1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KLHDC1Q8N7A1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.23■□□□□ 0.99
KLHDC1Q8N7A1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
KLHDC1Q8N7A1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KLHDC1Q8N7A1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KLHDC1Q8N7A1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KLHDC1Q8N7A1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KLHDC1Q8N7A1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KLHDC1Q8N7A1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KLHDC1Q8N7A1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KLHDC1Q8N7A1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KLHDC1Q8N7A1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.21■□□□□ 0.99
KLHDC1Q8N7A1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KLHDC1Q8N7A1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.2■□□□□ 0.98
KLHDC1Q8N7A1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
KLHDC1Q8N7A1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
KLHDC1Q8N7A1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
KLHDC1Q8N7A1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KLHDC1Q8N7A1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.19■□□□□ 0.98
KLHDC1Q8N7A1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.19■□□□□ 0.98
KLHDC1Q8N7A1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KLHDC1Q8N7A1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.18■□□□□ 0.98
KLHDC1Q8N7A1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.18■□□□□ 0.98
KLHDC1Q8N7A1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.18■□□□□ 0.98
KLHDC1Q8N7A1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KLHDC1Q8N7A1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
KLHDC1Q8N7A1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KLHDC1Q8N7A1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KLHDC1Q8N7A1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KLHDC1Q8N7A1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.16■□□□□ 0.98
KLHDC1Q8N7A1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.16■□□□□ 0.98
KLHDC1Q8N7A1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KLHDC1Q8N7A1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
KLHDC1Q8N7A1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.15■□□□□ 0.98
KLHDC1Q8N7A1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KLHDC1Q8N7A1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KLHDC1Q8N7A1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KLHDC1Q8N7A1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KLHDC1Q8N7A1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KLHDC1Q8N7A1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.13■□□□□ 0.97
KLHDC1Q8N7A1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KLHDC1Q8N7A1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KLHDC1Q8N7A1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
KLHDC1Q8N7A1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
KLHDC1Q8N7A1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.11■□□□□ 0.97
KLHDC1Q8N7A1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
KLHDC1Q8N7A1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KLHDC1Q8N7A1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KLHDC1Q8N7A1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.09■□□□□ 0.97
KLHDC1Q8N7A1 ZNRF2P2-203ENST00000454624 420 ntBASIC21.09■□□□□ 0.97
KLHDC1Q8N7A1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.09■□□□□ 0.97
KLHDC1Q8N7A1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.09■□□□□ 0.97
KLHDC1Q8N7A1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KLHDC1Q8N7A1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KLHDC1Q8N7A1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KLHDC1Q8N7A1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KLHDC1Q8N7A1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
KLHDC1Q8N7A1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
KLHDC1Q8N7A1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KLHDC1Q8N7A1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KLHDC1Q8N7A1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.07■□□□□ 0.96
KLHDC1Q8N7A1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
KLHDC1Q8N7A1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KLHDC1Q8N7A1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.06■□□□□ 0.96
KLHDC1Q8N7A1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.06■□□□□ 0.96
KLHDC1Q8N7A1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
KLHDC1Q8N7A1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
KLHDC1Q8N7A1 DUX4L29-201ENST00000425409 679 ntBASIC21.05■□□□□ 0.96
KLHDC1Q8N7A1 HLA-V-202ENST00000446817 847 ntBASIC21.05■□□□□ 0.96
KLHDC1Q8N7A1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.05■□□□□ 0.96
KLHDC1Q8N7A1 AC120057.4-201ENST00000624722 1615 ntBASIC21.04■□□□□ 0.96
KLHDC1Q8N7A1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KLHDC1Q8N7A1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.04■□□□□ 0.96
KLHDC1Q8N7A1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KLHDC1Q8N7A1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.04■□□□□ 0.96
KLHDC1Q8N7A1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KLHDC1Q8N7A1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.03■□□□□ 0.96
KLHDC1Q8N7A1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.02■□□□□ 0.96
KLHDC1Q8N7A1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHDC1Q8N7A1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.01■□□□□ 0.95
KLHDC1Q8N7A1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.01■□□□□ 0.95
KLHDC1Q8N7A1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC1Q8N7A1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms