Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AC097358.2-201ENST00000607541 1159 ntBASIC24.35■■□□□ 1.49
ZNF440Q8IYI8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.34■■□□□ 1.49
ZNF440Q8IYI8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
ZNF440Q8IYI8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
ZNF440Q8IYI8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZNF440Q8IYI8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZNF440Q8IYI8 AL391121.1-201ENST00000607967 1349 ntBASIC24.33■■□□□ 1.48
ZNF440Q8IYI8 AL135925.1-201ENST00000605920 1701 ntBASIC24.32■■□□□ 1.48
ZNF440Q8IYI8 ST7-AS1-201ENST00000456775 1889 ntBASIC24.32■■□□□ 1.48
ZNF440Q8IYI8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF440Q8IYI8 AC136428.2-201ENST00000563187 214 ntBASIC24.31■■□□□ 1.48
ZNF440Q8IYI8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF440Q8IYI8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF440Q8IYI8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.3■■□□□ 1.48
ZNF440Q8IYI8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF440Q8IYI8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ZNF440Q8IYI8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
ZNF440Q8IYI8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ZNF440Q8IYI8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ZNF440Q8IYI8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ZNF440Q8IYI8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZNF440Q8IYI8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZNF440Q8IYI8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.27■■□□□ 1.48
ZNF440Q8IYI8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
ZNF440Q8IYI8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZNF440Q8IYI8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZNF440Q8IYI8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
ZNF440Q8IYI8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ZNF440Q8IYI8 CAHM-201ENST00000604200 896 ntBASIC24.26■■□□□ 1.47
ZNF440Q8IYI8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZNF440Q8IYI8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZNF440Q8IYI8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.25■■□□□ 1.47
ZNF440Q8IYI8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
ZNF440Q8IYI8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZNF440Q8IYI8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZNF440Q8IYI8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZNF440Q8IYI8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZNF440Q8IYI8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZNF440Q8IYI8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.23■■□□□ 1.47
ZNF440Q8IYI8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZNF440Q8IYI8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZNF440Q8IYI8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZNF440Q8IYI8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
ZNF440Q8IYI8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZNF440Q8IYI8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZNF440Q8IYI8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZNF440Q8IYI8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
ZNF440Q8IYI8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ZNF440Q8IYI8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
ZNF440Q8IYI8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
ZNF440Q8IYI8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
ZNF440Q8IYI8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
ZNF440Q8IYI8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.18■■□□□ 1.46
ZNF440Q8IYI8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.18■■□□□ 1.46
ZNF440Q8IYI8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF440Q8IYI8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZNF440Q8IYI8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.17■■□□□ 1.46
ZNF440Q8IYI8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF440Q8IYI8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF440Q8IYI8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.16■■□□□ 1.46
ZNF440Q8IYI8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF440Q8IYI8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
ZNF440Q8IYI8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ZNF440Q8IYI8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ZNF440Q8IYI8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.14■■□□□ 1.45
ZNF440Q8IYI8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.14■■□□□ 1.45
ZNF440Q8IYI8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
ZNF440Q8IYI8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ZNF440Q8IYI8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ZNF440Q8IYI8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ZNF440Q8IYI8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
ZNF440Q8IYI8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF440Q8IYI8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
ZNF440Q8IYI8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF440Q8IYI8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF440Q8IYI8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ZNF440Q8IYI8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.12■■□□□ 1.45
ZNF440Q8IYI8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZNF440Q8IYI8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ZNF440Q8IYI8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ZNF440Q8IYI8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
ZNF440Q8IYI8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
ZNF440Q8IYI8 ABCB10P3-201ENST00000561950 2166 ntBASIC24.1■■□□□ 1.45
ZNF440Q8IYI8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF440Q8IYI8 AC010864.1-201ENST00000609407 1511 ntBASIC24.1■■□□□ 1.45
ZNF440Q8IYI8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF440Q8IYI8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ZNF440Q8IYI8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
ZNF440Q8IYI8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF440Q8IYI8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.09■■□□□ 1.45
ZNF440Q8IYI8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ZNF440Q8IYI8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF440Q8IYI8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.07■■□□□ 1.44
ZNF440Q8IYI8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ZNF440Q8IYI8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
ZNF440Q8IYI8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZNF440Q8IYI8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
ZNF440Q8IYI8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZNF440Q8IYI8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZNF440Q8IYI8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms