Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
ZC3H3Q8IXZ2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
ZC3H3Q8IXZ2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.21■■■□□ 2.27
ZC3H3Q8IXZ2 AC136428.2-201ENST00000563187 214 ntBASIC29.21■■■□□ 2.27
ZC3H3Q8IXZ2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
ZC3H3Q8IXZ2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
ZC3H3Q8IXZ2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
ZC3H3Q8IXZ2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.19■■■□□ 2.26
ZC3H3Q8IXZ2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.19■■■□□ 2.26
ZC3H3Q8IXZ2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ZC3H3Q8IXZ2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
ZC3H3Q8IXZ2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ZC3H3Q8IXZ2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
ZC3H3Q8IXZ2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
ZC3H3Q8IXZ2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
ZC3H3Q8IXZ2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
ZC3H3Q8IXZ2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ZC3H3Q8IXZ2 CAHM-201ENST00000604200 896 ntBASIC29.15■■■□□ 2.26
ZC3H3Q8IXZ2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ZC3H3Q8IXZ2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ZC3H3Q8IXZ2 AL391121.1-201ENST00000607967 1349 ntBASIC29.14■■■□□ 2.25
ZC3H3Q8IXZ2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
ZC3H3Q8IXZ2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
ZC3H3Q8IXZ2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
ZC3H3Q8IXZ2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
ZC3H3Q8IXZ2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
ZC3H3Q8IXZ2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ZC3H3Q8IXZ2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
ZC3H3Q8IXZ2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
ZC3H3Q8IXZ2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
ZC3H3Q8IXZ2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.11■■■□□ 2.25
ZC3H3Q8IXZ2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.11■■■□□ 2.25
ZC3H3Q8IXZ2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
ZC3H3Q8IXZ2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
ZC3H3Q8IXZ2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.09■■■□□ 2.25
ZC3H3Q8IXZ2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
ZC3H3Q8IXZ2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
ZC3H3Q8IXZ2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.08■■■□□ 2.25
ZC3H3Q8IXZ2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ZC3H3Q8IXZ2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.08■■■□□ 2.25
ZC3H3Q8IXZ2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ZC3H3Q8IXZ2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
ZC3H3Q8IXZ2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
ZC3H3Q8IXZ2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
ZC3H3Q8IXZ2 ABCB10P3-201ENST00000561950 2166 ntBASIC29.07■■■□□ 2.24
ZC3H3Q8IXZ2 AC097358.2-201ENST00000607541 1159 ntBASIC29.07■■■□□ 2.24
ZC3H3Q8IXZ2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
ZC3H3Q8IXZ2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.06■■■□□ 2.24
ZC3H3Q8IXZ2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
ZC3H3Q8IXZ2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.06■■■□□ 2.24
ZC3H3Q8IXZ2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
ZC3H3Q8IXZ2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
ZC3H3Q8IXZ2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
ZC3H3Q8IXZ2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
ZC3H3Q8IXZ2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.02■■■□□ 2.24
ZC3H3Q8IXZ2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
ZC3H3Q8IXZ2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.24
ZC3H3Q8IXZ2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.01■■■□□ 2.23
ZC3H3Q8IXZ2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
ZC3H3Q8IXZ2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
ZC3H3Q8IXZ2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
ZC3H3Q8IXZ2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29■■■□□ 2.23
ZC3H3Q8IXZ2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.99■■■□□ 2.23
ZC3H3Q8IXZ2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ZC3H3Q8IXZ2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.98■■■□□ 2.23
ZC3H3Q8IXZ2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.98■■■□□ 2.23
ZC3H3Q8IXZ2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ZC3H3Q8IXZ2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
ZC3H3Q8IXZ2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.97■■■□□ 2.23
ZC3H3Q8IXZ2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
ZC3H3Q8IXZ2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.97■■■□□ 2.23
ZC3H3Q8IXZ2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
ZC3H3Q8IXZ2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
ZC3H3Q8IXZ2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
ZC3H3Q8IXZ2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
ZC3H3Q8IXZ2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
ZC3H3Q8IXZ2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
ZC3H3Q8IXZ2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
ZC3H3Q8IXZ2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
ZC3H3Q8IXZ2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
ZC3H3Q8IXZ2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.94■■■□□ 2.22
ZC3H3Q8IXZ2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
ZC3H3Q8IXZ2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
ZC3H3Q8IXZ2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
ZC3H3Q8IXZ2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
ZC3H3Q8IXZ2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
ZC3H3Q8IXZ2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
ZC3H3Q8IXZ2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
ZC3H3Q8IXZ2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
ZC3H3Q8IXZ2 AC010864.1-201ENST00000609407 1511 ntBASIC28.9■■■□□ 2.22
ZC3H3Q8IXZ2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.9■■■□□ 2.22
ZC3H3Q8IXZ2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.89■■■□□ 2.22
ZC3H3Q8IXZ2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ZC3H3Q8IXZ2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
ZC3H3Q8IXZ2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ZC3H3Q8IXZ2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ZC3H3Q8IXZ2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.86■■■□□ 2.21
ZC3H3Q8IXZ2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ZC3H3Q8IXZ2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ZC3H3Q8IXZ2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms