Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CUL9Q8IWT3 AL033527.3-201ENST00000566366 1196 ntBASIC28.58■■■□□ 2.16
CUL9Q8IWT3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CUL9Q8IWT3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.57■■■□□ 2.16
CUL9Q8IWT3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CUL9Q8IWT3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
CUL9Q8IWT3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CUL9Q8IWT3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.54■■■□□ 2.16
CUL9Q8IWT3 AL035685.1-201ENST00000636663 812 ntBASIC28.53■■■□□ 2.16
CUL9Q8IWT3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.53■■■□□ 2.16
CUL9Q8IWT3 GPX1-201ENST00000419349 1106 ntBASIC28.52■■■□□ 2.16
CUL9Q8IWT3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CUL9Q8IWT3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CUL9Q8IWT3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
CUL9Q8IWT3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CUL9Q8IWT3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CUL9Q8IWT3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
CUL9Q8IWT3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CUL9Q8IWT3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.48■■■□□ 2.15
CUL9Q8IWT3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
CUL9Q8IWT3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.47■■■□□ 2.15
CUL9Q8IWT3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
CUL9Q8IWT3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CUL9Q8IWT3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CUL9Q8IWT3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CUL9Q8IWT3 AC008813.1-201ENST00000536597 885 ntBASIC28.45■■■□□ 2.14
CUL9Q8IWT3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
CUL9Q8IWT3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CUL9Q8IWT3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CUL9Q8IWT3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.41■■■□□ 2.14
CUL9Q8IWT3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CUL9Q8IWT3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.4■■■□□ 2.14
CUL9Q8IWT3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.4■■■□□ 2.14
CUL9Q8IWT3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.38■■■□□ 2.13
CUL9Q8IWT3 DUX4L13-201ENST00000554103 1267 ntBASIC28.38■■■□□ 2.13
CUL9Q8IWT3 DUX4L15-201ENST00000611059 1267 ntBASIC28.38■■■□□ 2.13
CUL9Q8IWT3 DUX4L23-201ENST00000615195 1269 ntBASIC28.38■■■□□ 2.13
CUL9Q8IWT3 DUX4L24-201ENST00000617576 1269 ntBASIC28.38■■■□□ 2.13
CUL9Q8IWT3 DUX4L22-201ENST00000618238 1269 ntBASIC28.38■■■□□ 2.13
CUL9Q8IWT3 DUX4L20-201ENST00000619712 1269 ntBASIC28.38■■■□□ 2.13
CUL9Q8IWT3 DUX4L21-201ENST00000622058 1269 ntBASIC28.38■■■□□ 2.13
CUL9Q8IWT3 DUX4L10-201ENST00000622460 1267 ntBASIC28.38■■■□□ 2.13
CUL9Q8IWT3 DUX4L25-201ENST00000624915 1269 ntBASIC28.38■■■□□ 2.13
CUL9Q8IWT3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CUL9Q8IWT3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.37■■■□□ 2.13
CUL9Q8IWT3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CUL9Q8IWT3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.34■■■□□ 2.13
CUL9Q8IWT3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.34■■■□□ 2.13
CUL9Q8IWT3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.33■■■□□ 2.13
CUL9Q8IWT3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
CUL9Q8IWT3 TSPY13P-201ENST00000338964 914 ntBASIC28.31■■■□□ 2.12
CUL9Q8IWT3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CUL9Q8IWT3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CUL9Q8IWT3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CUL9Q8IWT3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CUL9Q8IWT3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.3■■■□□ 2.12
CUL9Q8IWT3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CUL9Q8IWT3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.3■■■□□ 2.12
CUL9Q8IWT3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CUL9Q8IWT3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CUL9Q8IWT3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CUL9Q8IWT3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CUL9Q8IWT3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.28■■■□□ 2.12
CUL9Q8IWT3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.27■■■□□ 2.12
CUL9Q8IWT3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CUL9Q8IWT3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
CUL9Q8IWT3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CUL9Q8IWT3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.26■■■□□ 2.11
CUL9Q8IWT3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CUL9Q8IWT3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CUL9Q8IWT3 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.26■■■□□ 2.11
CUL9Q8IWT3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.26■■■□□ 2.11
CUL9Q8IWT3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CUL9Q8IWT3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
CUL9Q8IWT3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.24■■■□□ 2.11
CUL9Q8IWT3 AC131212.1-201ENST00000613771 668 ntBASIC28.24■■■□□ 2.11
CUL9Q8IWT3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CUL9Q8IWT3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.23■■■□□ 2.11
CUL9Q8IWT3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CUL9Q8IWT3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CUL9Q8IWT3 AL451085.2-201ENST00000605085 799 ntBASIC28.22■■■□□ 2.11
CUL9Q8IWT3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.22■■■□□ 2.11
CUL9Q8IWT3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CUL9Q8IWT3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CUL9Q8IWT3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CUL9Q8IWT3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CUL9Q8IWT3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CUL9Q8IWT3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CUL9Q8IWT3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CUL9Q8IWT3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
CUL9Q8IWT3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
CUL9Q8IWT3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
CUL9Q8IWT3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CUL9Q8IWT3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CUL9Q8IWT3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
CUL9Q8IWT3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CUL9Q8IWT3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CUL9Q8IWT3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CUL9Q8IWT3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.17■■■□□ 2.1
CUL9Q8IWT3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms