Protein–RNA interactions for Protein: Q86UQ4

ABCA13, ATP-binding cassette sub-family A member 13, humanhuman

Predictions only

Length 5,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13Q86UQ4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ABCA13Q86UQ4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ABCA13Q86UQ4 AC012354.3-201ENST00000623734 483 ntBASIC17.03■□□□□ 0.32
ABCA13Q86UQ4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17■□□□□ 0.31
ABCA13Q86UQ4 NTF6A-201ENST00000591175 560 ntBASIC17■□□□□ 0.31
ABCA13Q86UQ4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17■□□□□ 0.31
ABCA13Q86UQ4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17■□□□□ 0.31
ABCA13Q86UQ4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ABCA13Q86UQ4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ABCA13Q86UQ4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.99■□□□□ 0.31
ABCA13Q86UQ4 AC008813.1-201ENST00000536597 885 ntBASIC16.99■□□□□ 0.31
ABCA13Q86UQ4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ABCA13Q86UQ4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ABCA13Q86UQ4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ABCA13Q86UQ4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.99■□□□□ 0.31
ABCA13Q86UQ4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.98■□□□□ 0.31
ABCA13Q86UQ4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
ABCA13Q86UQ4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ABCA13Q86UQ4 MIR6090-201ENST00000622481 60 ntBASIC16.98■□□□□ 0.31
ABCA13Q86UQ4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.97■□□□□ 0.31
ABCA13Q86UQ4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.96■□□□□ 0.31
ABCA13Q86UQ4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA13Q86UQ4 RARRES2P1-201ENST00000474487 481 ntBASIC16.96■□□□□ 0.31
ABCA13Q86UQ4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ABCA13Q86UQ4 AL035685.1-201ENST00000636663 812 ntBASIC16.96■□□□□ 0.31
ABCA13Q86UQ4 GPX1-201ENST00000419349 1106 ntBASIC16.95■□□□□ 0.3
ABCA13Q86UQ4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC16.95■□□□□ 0.3
ABCA13Q86UQ4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA13Q86UQ4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA13Q86UQ4 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.94■□□□□ 0.3
ABCA13Q86UQ4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ABCA13Q86UQ4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA13Q86UQ4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA13Q86UQ4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ABCA13Q86UQ4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA13Q86UQ4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA13Q86UQ4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA13Q86UQ4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA13Q86UQ4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA13Q86UQ4 DUX4L13-201ENST00000554103 1267 ntBASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 DUX4L15-201ENST00000611059 1267 ntBASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 DUX4L23-201ENST00000615195 1269 ntBASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 DUX4L24-201ENST00000617576 1269 ntBASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 DUX4L22-201ENST00000618238 1269 ntBASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 DUX4L20-201ENST00000619712 1269 ntBASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 DUX4L21-201ENST00000622058 1269 ntBASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 DUX4L10-201ENST00000622460 1267 ntBASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 DUX4L25-201ENST00000624915 1269 ntBASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.91■□□□□ 0.3
ABCA13Q86UQ4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC16.9■□□□□ 0.3
ABCA13Q86UQ4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA13Q86UQ4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.9■□□□□ 0.3
ABCA13Q86UQ4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA13Q86UQ4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.9■□□□□ 0.3
ABCA13Q86UQ4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.89■□□□□ 0.29
ABCA13Q86UQ4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.89■□□□□ 0.29
ABCA13Q86UQ4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ABCA13Q86UQ4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.88■□□□□ 0.29
ABCA13Q86UQ4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ABCA13Q86UQ4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCA13Q86UQ4 AL451085.2-201ENST00000605085 799 ntBASIC16.87■□□□□ 0.29
ABCA13Q86UQ4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA13Q86UQ4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA13Q86UQ4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.86■□□□□ 0.29
ABCA13Q86UQ4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC16.86■□□□□ 0.29
ABCA13Q86UQ4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ABCA13Q86UQ4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA13Q86UQ4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.86■□□□□ 0.29
ABCA13Q86UQ4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA13Q86UQ4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ABCA13Q86UQ4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA13Q86UQ4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA13Q86UQ4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA13Q86UQ4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA13Q86UQ4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA13Q86UQ4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA13Q86UQ4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA13Q86UQ4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA13Q86UQ4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA13Q86UQ4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.83■□□□□ 0.29
ABCA13Q86UQ4 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.83■□□□□ 0.28
ABCA13Q86UQ4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCA13Q86UQ4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ABCA13Q86UQ4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
ABCA13Q86UQ4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ABCA13Q86UQ4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.81■□□□□ 0.28
ABCA13Q86UQ4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ABCA13Q86UQ4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCA13Q86UQ4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC16.8■□□□□ 0.28
ABCA13Q86UQ4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCA13Q86UQ4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
ABCA13Q86UQ4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ABCA13Q86UQ4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ABCA13Q86UQ4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.77■□□□□ 0.27
ABCA13Q86UQ4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
ABCA13Q86UQ4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCA13Q86UQ4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ABCA13Q86UQ4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
ABCA13Q86UQ4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms