Protein–RNA interactions for Protein: Q7LGC8

CHST3, Carbohydrate sulfotransferase 3, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3Q7LGC8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHST3Q7LGC8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
CHST3Q7LGC8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHST3Q7LGC8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.56■■■□□ 2.64
CHST3Q7LGC8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CHST3Q7LGC8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.55■■■□□ 2.64
CHST3Q7LGC8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CHST3Q7LGC8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHST3Q7LGC8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHST3Q7LGC8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHST3Q7LGC8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHST3Q7LGC8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHST3Q7LGC8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CHST3Q7LGC8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.53■■■□□ 2.64
CHST3Q7LGC8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.52■■■□□ 2.64
CHST3Q7LGC8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHST3Q7LGC8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHST3Q7LGC8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CHST3Q7LGC8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.5■■■□□ 2.63
CHST3Q7LGC8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
CHST3Q7LGC8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHST3Q7LGC8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.49■■■□□ 2.63
CHST3Q7LGC8 ABCB10P1-201ENST00000614297 2181 ntBASIC31.49■■■□□ 2.63
CHST3Q7LGC8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CHST3Q7LGC8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHST3Q7LGC8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CHST3Q7LGC8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CHST3Q7LGC8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHST3Q7LGC8 RPS2P35-201ENST00000443417 897 ntBASIC31.45■■■□□ 2.63
CHST3Q7LGC8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CHST3Q7LGC8 MIR762-201ENST00000390236 83 ntBASIC31.44■■■□□ 2.62
CHST3Q7LGC8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHST3Q7LGC8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHST3Q7LGC8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.42■■■□□ 2.62
CHST3Q7LGC8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CHST3Q7LGC8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
CHST3Q7LGC8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CHST3Q7LGC8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHST3Q7LGC8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
CHST3Q7LGC8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.4■■■□□ 2.62
CHST3Q7LGC8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHST3Q7LGC8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHST3Q7LGC8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHST3Q7LGC8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
CHST3Q7LGC8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
CHST3Q7LGC8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHST3Q7LGC8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
CHST3Q7LGC8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
CHST3Q7LGC8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHST3Q7LGC8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.37■■■□□ 2.61
CHST3Q7LGC8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHST3Q7LGC8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHST3Q7LGC8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHST3Q7LGC8 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.35■■■□□ 2.61
CHST3Q7LGC8 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.35■■■□□ 2.61
CHST3Q7LGC8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHST3Q7LGC8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
CHST3Q7LGC8 AL135925.1-201ENST00000605920 1701 ntBASIC31.33■■■□□ 2.61
CHST3Q7LGC8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHST3Q7LGC8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CHST3Q7LGC8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHST3Q7LGC8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CHST3Q7LGC8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.31■■■□□ 2.6
CHST3Q7LGC8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHST3Q7LGC8 ST7-AS1-201ENST00000456775 1889 ntBASIC31.28■■■□□ 2.6
CHST3Q7LGC8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHST3Q7LGC8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CHST3Q7LGC8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
CHST3Q7LGC8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.27■■■□□ 2.6
CHST3Q7LGC8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.26■■■□□ 2.59
CHST3Q7LGC8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CHST3Q7LGC8 AC005559.1-201ENST00000589661 871 ntBASIC31.25■■■□□ 2.59
CHST3Q7LGC8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.25■■■□□ 2.59
CHST3Q7LGC8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
CHST3Q7LGC8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHST3Q7LGC8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHST3Q7LGC8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.24■■■□□ 2.59
CHST3Q7LGC8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.24■■■□□ 2.59
CHST3Q7LGC8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.23■■■□□ 2.59
CHST3Q7LGC8 DUX4L28-201ENST00000623687 678 ntBASIC31.23■■■□□ 2.59
CHST3Q7LGC8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHST3Q7LGC8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.22■■■□□ 2.59
CHST3Q7LGC8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHST3Q7LGC8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
CHST3Q7LGC8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.21■■■□□ 2.59
CHST3Q7LGC8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHST3Q7LGC8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHST3Q7LGC8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CHST3Q7LGC8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.19■■■□□ 2.58
CHST3Q7LGC8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHST3Q7LGC8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.18■■■□□ 2.58
CHST3Q7LGC8 AL162393.1-201ENST00000437852 946 ntBASIC31.18■■■□□ 2.58
CHST3Q7LGC8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHST3Q7LGC8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.17■■■□□ 2.58
CHST3Q7LGC8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.17■■■□□ 2.58
CHST3Q7LGC8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHST3Q7LGC8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHST3Q7LGC8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHST3Q7LGC8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHST3Q7LGC8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms