Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPH1Q70E73 AC139426.1-201ENST00000568218 2529 ntBASIC26.6■■□□□ 1.85
RAPH1Q70E73 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RAPH1Q70E73 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPH1Q70E73 ST7-AS1-201ENST00000456775 1889 ntBASIC26.59■■□□□ 1.85
RAPH1Q70E73 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RAPH1Q70E73 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPH1Q70E73 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.59■■□□□ 1.85
RAPH1Q70E73 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPH1Q70E73 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RAPH1Q70E73 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPH1Q70E73 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
RAPH1Q70E73 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAPH1Q70E73 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RAPH1Q70E73 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPH1Q70E73 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPH1Q70E73 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAPH1Q70E73 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.54■■□□□ 1.84
RAPH1Q70E73 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RAPH1Q70E73 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RAPH1Q70E73 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RAPH1Q70E73 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RAPH1Q70E73 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RAPH1Q70E73 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
RAPH1Q70E73 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.5■■□□□ 1.83
RAPH1Q70E73 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAPH1Q70E73 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.5■■□□□ 1.83
RAPH1Q70E73 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAPH1Q70E73 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAPH1Q70E73 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.48■■□□□ 1.83
RAPH1Q70E73 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPH1Q70E73 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
RAPH1Q70E73 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RAPH1Q70E73 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RAPH1Q70E73 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
RAPH1Q70E73 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPH1Q70E73 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.46■■□□□ 1.83
RAPH1Q70E73 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.45■■□□□ 1.83
RAPH1Q70E73 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
RAPH1Q70E73 AL135925.1-201ENST00000605920 1701 ntBASIC26.45■■□□□ 1.83
RAPH1Q70E73 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RAPH1Q70E73 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
RAPH1Q70E73 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
RAPH1Q70E73 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RAPH1Q70E73 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RAPH1Q70E73 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.42■■□□□ 1.82
RAPH1Q70E73 WASH5P-204ENST00000632292 975 ntBASIC26.42■■□□□ 1.82
RAPH1Q70E73 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
RAPH1Q70E73 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RAPH1Q70E73 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.4■■□□□ 1.82
RAPH1Q70E73 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RAPH1Q70E73 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.39■■□□□ 1.82
RAPH1Q70E73 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RAPH1Q70E73 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
RAPH1Q70E73 AL133380.1-201ENST00000506013 324 ntBASIC26.38■■□□□ 1.81
RAPH1Q70E73 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
RAPH1Q70E73 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.37■■□□□ 1.81
RAPH1Q70E73 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.37■■□□□ 1.81
RAPH1Q70E73 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.36■■□□□ 1.81
RAPH1Q70E73 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAPH1Q70E73 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RAPH1Q70E73 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAPH1Q70E73 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.35■■□□□ 1.81
RAPH1Q70E73 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAPH1Q70E73 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPH1Q70E73 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RAPH1Q70E73 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RAPH1Q70E73 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAPH1Q70E73 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.31■■□□□ 1.8
RAPH1Q70E73 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAPH1Q70E73 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAPH1Q70E73 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RAPH1Q70E73 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAPH1Q70E73 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RAPH1Q70E73 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
RAPH1Q70E73 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
RAPH1Q70E73 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RAPH1Q70E73 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RAPH1Q70E73 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
RAPH1Q70E73 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAPH1Q70E73 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.26■■□□□ 1.79
RAPH1Q70E73 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RAPH1Q70E73 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.24■■□□□ 1.79
RAPH1Q70E73 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAPH1Q70E73 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAPH1Q70E73 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.21■■□□□ 1.79
RAPH1Q70E73 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.21■■□□□ 1.79
RAPH1Q70E73 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAPH1Q70E73 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RAPH1Q70E73 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RAPH1Q70E73 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.2■■□□□ 1.78
RAPH1Q70E73 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RAPH1Q70E73 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAPH1Q70E73 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.19■■□□□ 1.78
RAPH1Q70E73 RARRES2P7-201ENST00000567349 469 ntBASIC26.19■■□□□ 1.78
RAPH1Q70E73 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
RAPH1Q70E73 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RAPH1Q70E73 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RAPH1Q70E73 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RAPH1Q70E73 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms