Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.92■■□□□ 1.42
TMEM53Q6P2H8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM53Q6P2H8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM53Q6P2H8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM53Q6P2H8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.91■■□□□ 1.42
TMEM53Q6P2H8 SETD8P1-201ENST00000623146 1180 ntBASIC23.91■■□□□ 1.42
TMEM53Q6P2H8 AC120057.4-201ENST00000624722 1615 ntBASIC23.91■■□□□ 1.42
TMEM53Q6P2H8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.9■■□□□ 1.42
TMEM53Q6P2H8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.9■■□□□ 1.42
TMEM53Q6P2H8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM53Q6P2H8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.9■■□□□ 1.42
TMEM53Q6P2H8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM53Q6P2H8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM53Q6P2H8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
TMEM53Q6P2H8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TMEM53Q6P2H8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TMEM53Q6P2H8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TMEM53Q6P2H8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM53Q6P2H8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM53Q6P2H8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.87■■□□□ 1.41
TMEM53Q6P2H8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM53Q6P2H8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TMEM53Q6P2H8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM53Q6P2H8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.85■■□□□ 1.41
TMEM53Q6P2H8 AL133380.1-201ENST00000506013 324 ntBASIC23.85■■□□□ 1.41
TMEM53Q6P2H8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM53Q6P2H8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM53Q6P2H8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM53Q6P2H8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM53Q6P2H8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM53Q6P2H8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM53Q6P2H8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM53Q6P2H8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM53Q6P2H8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM53Q6P2H8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM53Q6P2H8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM53Q6P2H8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM53Q6P2H8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.8■■□□□ 1.4
TMEM53Q6P2H8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM53Q6P2H8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TMEM53Q6P2H8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM53Q6P2H8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM53Q6P2H8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM53Q6P2H8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM53Q6P2H8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.78■■□□□ 1.4
TMEM53Q6P2H8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM53Q6P2H8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TMEM53Q6P2H8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
TMEM53Q6P2H8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM53Q6P2H8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
TMEM53Q6P2H8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.76■■□□□ 1.39
TMEM53Q6P2H8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM53Q6P2H8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM53Q6P2H8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TMEM53Q6P2H8 AC097358.2-201ENST00000607541 1159 ntBASIC23.74■■□□□ 1.39
TMEM53Q6P2H8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM53Q6P2H8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM53Q6P2H8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TMEM53Q6P2H8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
TMEM53Q6P2H8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM53Q6P2H8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
TMEM53Q6P2H8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.71■■□□□ 1.39
TMEM53Q6P2H8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM53Q6P2H8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.7■■□□□ 1.38
TMEM53Q6P2H8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.7■■□□□ 1.38
TMEM53Q6P2H8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM53Q6P2H8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TMEM53Q6P2H8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TMEM53Q6P2H8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM53Q6P2H8 WASH5P-204ENST00000632292 975 ntBASIC23.68■■□□□ 1.38
TMEM53Q6P2H8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM53Q6P2H8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM53Q6P2H8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM53Q6P2H8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM53Q6P2H8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
TMEM53Q6P2H8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM53Q6P2H8 AC136428.2-201ENST00000563187 214 ntBASIC23.66■■□□□ 1.38
TMEM53Q6P2H8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM53Q6P2H8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.65■■□□□ 1.38
TMEM53Q6P2H8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM53Q6P2H8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM53Q6P2H8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM53Q6P2H8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
TMEM53Q6P2H8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.64■■□□□ 1.37
TMEM53Q6P2H8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.64■■□□□ 1.37
TMEM53Q6P2H8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM53Q6P2H8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM53Q6P2H8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM53Q6P2H8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM53Q6P2H8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM53Q6P2H8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM53Q6P2H8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM53Q6P2H8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
TMEM53Q6P2H8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM53Q6P2H8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM53Q6P2H8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM53Q6P2H8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM53Q6P2H8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.61■■□□□ 1.37
TMEM53Q6P2H8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM53Q6P2H8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms