Protein–RNA interactions for Protein: Q68G75

LEMD1, LEM domain-containing protein 1, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1Q68G75 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD1Q68G75 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.72■□□□□ 0.91
LEMD1Q68G75 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LEMD1Q68G75 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LEMD1Q68G75 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LEMD1Q68G75 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LEMD1Q68G75 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LEMD1Q68G75 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LEMD1Q68G75 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.7■□□□□ 0.9
LEMD1Q68G75 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LEMD1Q68G75 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LEMD1Q68G75 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LEMD1Q68G75 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LEMD1Q68G75 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LEMD1Q68G75 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LEMD1Q68G75 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LEMD1Q68G75 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
LEMD1Q68G75 ST7-AS1-201ENST00000456775 1889 ntBASIC20.68■□□□□ 0.9
LEMD1Q68G75 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.68■□□□□ 0.9
LEMD1Q68G75 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LEMD1Q68G75 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LEMD1Q68G75 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LEMD1Q68G75 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LEMD1Q68G75 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LEMD1Q68G75 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LEMD1Q68G75 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.65■□□□□ 0.9
LEMD1Q68G75 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LEMD1Q68G75 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LEMD1Q68G75 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LEMD1Q68G75 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.64■□□□□ 0.89
LEMD1Q68G75 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LEMD1Q68G75 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LEMD1Q68G75 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LEMD1Q68G75 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LEMD1Q68G75 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.63■□□□□ 0.89
LEMD1Q68G75 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.63■□□□□ 0.89
LEMD1Q68G75 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LEMD1Q68G75 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LEMD1Q68G75 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LEMD1Q68G75 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LEMD1Q68G75 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.6■□□□□ 0.89
LEMD1Q68G75 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
LEMD1Q68G75 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LEMD1Q68G75 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.6■□□□□ 0.89
LEMD1Q68G75 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
LEMD1Q68G75 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LEMD1Q68G75 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LEMD1Q68G75 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LEMD1Q68G75 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LEMD1Q68G75 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.57■□□□□ 0.88
LEMD1Q68G75 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LEMD1Q68G75 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.57■□□□□ 0.88
LEMD1Q68G75 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LEMD1Q68G75 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LEMD1Q68G75 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LEMD1Q68G75 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LEMD1Q68G75 RARRES2P7-201ENST00000567349 469 ntBASIC20.54■□□□□ 0.88
LEMD1Q68G75 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LEMD1Q68G75 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD1Q68G75 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD1Q68G75 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
LEMD1Q68G75 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.51■□□□□ 0.87
LEMD1Q68G75 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LEMD1Q68G75 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.5■□□□□ 0.87
LEMD1Q68G75 AL135925.1-201ENST00000605920 1701 ntBASIC20.5■□□□□ 0.87
LEMD1Q68G75 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.5■□□□□ 0.87
LEMD1Q68G75 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LEMD1Q68G75 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LEMD1Q68G75 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LEMD1Q68G75 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LEMD1Q68G75 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LEMD1Q68G75 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LEMD1Q68G75 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
LEMD1Q68G75 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LEMD1Q68G75 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
LEMD1Q68G75 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.87
LEMD1Q68G75 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.45■□□□□ 0.86
LEMD1Q68G75 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LEMD1Q68G75 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LEMD1Q68G75 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LEMD1Q68G75 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.43■□□□□ 0.86
LEMD1Q68G75 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
LEMD1Q68G75 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LEMD1Q68G75 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LEMD1Q68G75 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LEMD1Q68G75 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LEMD1Q68G75 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LEMD1Q68G75 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LEMD1Q68G75 SETD8P1-201ENST00000623146 1180 ntBASIC20.41■□□□□ 0.86
LEMD1Q68G75 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LEMD1Q68G75 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LEMD1Q68G75 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LEMD1Q68G75 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LEMD1Q68G75 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LEMD1Q68G75 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LEMD1Q68G75 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LEMD1Q68G75 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LEMD1Q68G75 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LEMD1Q68G75 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LEMD1Q68G75 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms