Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RSPO1Q2MKA7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 AC097358.2-201ENST00000607541 1159 ntBASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.23■■□□□ 1.31
RSPO1Q2MKA7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
RSPO1Q2MKA7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RSPO1Q2MKA7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.23■■□□□ 1.31
RSPO1Q2MKA7 AL135925.1-201ENST00000605920 1701 ntBASIC23.22■■□□□ 1.31
RSPO1Q2MKA7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RSPO1Q2MKA7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RSPO1Q2MKA7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.21■■□□□ 1.31
RSPO1Q2MKA7 AL391121.1-201ENST00000607967 1349 ntBASIC23.21■■□□□ 1.31
RSPO1Q2MKA7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RSPO1Q2MKA7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RSPO1Q2MKA7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPO1Q2MKA7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPO1Q2MKA7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RSPO1Q2MKA7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPO1Q2MKA7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RSPO1Q2MKA7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RSPO1Q2MKA7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RSPO1Q2MKA7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
RSPO1Q2MKA7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO1Q2MKA7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO1Q2MKA7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO1Q2MKA7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RSPO1Q2MKA7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPO1Q2MKA7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPO1Q2MKA7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
RSPO1Q2MKA7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPO1Q2MKA7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.15■■□□□ 1.3
RSPO1Q2MKA7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RSPO1Q2MKA7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.14■■□□□ 1.3
RSPO1Q2MKA7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RSPO1Q2MKA7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.14■■□□□ 1.29
RSPO1Q2MKA7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RSPO1Q2MKA7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RSPO1Q2MKA7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RSPO1Q2MKA7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO1Q2MKA7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO1Q2MKA7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RSPO1Q2MKA7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO1Q2MKA7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO1Q2MKA7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.12■■□□□ 1.29
RSPO1Q2MKA7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO1Q2MKA7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO1Q2MKA7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 ABCB10P3-201ENST00000561950 2166 ntBASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RSPO1Q2MKA7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RSPO1Q2MKA7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RSPO1Q2MKA7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
RSPO1Q2MKA7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.08■■□□□ 1.29
RSPO1Q2MKA7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RSPO1Q2MKA7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RSPO1Q2MKA7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RSPO1Q2MKA7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
RSPO1Q2MKA7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RSPO1Q2MKA7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RSPO1Q2MKA7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RSPO1Q2MKA7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
RSPO1Q2MKA7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RSPO1Q2MKA7 AC139426.1-201ENST00000568218 2529 ntBASIC23.04■■□□□ 1.28
RSPO1Q2MKA7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.02■■□□□ 1.28
RSPO1Q2MKA7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RSPO1Q2MKA7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RSPO1Q2MKA7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RSPO1Q2MKA7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RSPO1Q2MKA7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RSPO1Q2MKA7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RSPO1Q2MKA7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23■■□□□ 1.27
RSPO1Q2MKA7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23■■□□□ 1.27
RSPO1Q2MKA7 SUZ12P1-203ENST00000578195 985 ntBASIC23■■□□□ 1.27
RSPO1Q2MKA7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RSPO1Q2MKA7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RSPO1Q2MKA7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.99■■□□□ 1.27
RSPO1Q2MKA7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.99■■□□□ 1.27
RSPO1Q2MKA7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RSPO1Q2MKA7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RSPO1Q2MKA7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.97■■□□□ 1.27
RSPO1Q2MKA7 AC010864.1-201ENST00000609407 1511 ntBASIC22.97■■□□□ 1.27
RSPO1Q2MKA7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms