Protein–RNA interactions for Protein: P80188

LCN2, Neutrophil gelatinase-associated lipocalin, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2P80188 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
LCN2P80188 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LCN2P80188 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LCN2P80188 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LCN2P80188 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LCN2P80188 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LCN2P80188 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LCN2P80188 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
LCN2P80188 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.24■■□□□ 1.15
LCN2P80188 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LCN2P80188 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
LCN2P80188 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LCN2P80188 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LCN2P80188 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LCN2P80188 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.22■■□□□ 1.15
LCN2P80188 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.22■■□□□ 1.15
LCN2P80188 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.21■■□□□ 1.15
LCN2P80188 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.21■■□□□ 1.15
LCN2P80188 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.21■■□□□ 1.15
LCN2P80188 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LCN2P80188 ABHD17AP4-201ENST00000411545 909 ntBASIC22.2■■□□□ 1.14
LCN2P80188 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LCN2P80188 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LCN2P80188 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.19■■□□□ 1.14
LCN2P80188 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LCN2P80188 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
LCN2P80188 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LCN2P80188 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
LCN2P80188 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LCN2P80188 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LCN2P80188 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.17■■□□□ 1.14
LCN2P80188 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LCN2P80188 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LCN2P80188 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LCN2P80188 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LCN2P80188 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.16■■□□□ 1.14
LCN2P80188 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LCN2P80188 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
LCN2P80188 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LCN2P80188 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LCN2P80188 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.14■■□□□ 1.13
LCN2P80188 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
LCN2P80188 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
LCN2P80188 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.13■■□□□ 1.13
LCN2P80188 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.13■■□□□ 1.13
LCN2P80188 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.13■■□□□ 1.13
LCN2P80188 MIR7108-201ENST00000614319 87 ntBASIC22.13■■□□□ 1.13
LCN2P80188 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LCN2P80188 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LCN2P80188 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LCN2P80188 AL161658.1-201ENST00000623641 1967 ntBASIC22.12■■□□□ 1.13
LCN2P80188 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
LCN2P80188 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LCN2P80188 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LCN2P80188 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LCN2P80188 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
LCN2P80188 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LCN2P80188 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LCN2P80188 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.1■■□□□ 1.13
LCN2P80188 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LCN2P80188 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.09■■□□□ 1.13
LCN2P80188 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.09■■□□□ 1.13
LCN2P80188 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.09■■□□□ 1.13
LCN2P80188 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.08■■□□□ 1.13
LCN2P80188 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LCN2P80188 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.08■■□□□ 1.12
LCN2P80188 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LCN2P80188 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LCN2P80188 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LCN2P80188 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LCN2P80188 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LCN2P80188 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
LCN2P80188 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LCN2P80188 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LCN2P80188 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.06■■□□□ 1.12
LCN2P80188 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.06■■□□□ 1.12
LCN2P80188 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LCN2P80188 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.05■■□□□ 1.12
LCN2P80188 DUX4L29-201ENST00000425409 679 ntBASIC22.05■■□□□ 1.12
LCN2P80188 AC108673.1-201ENST00000510422 1159 ntBASIC22.04■■□□□ 1.12
LCN2P80188 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LCN2P80188 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LCN2P80188 ZNRF2P2-203ENST00000454624 420 ntBASIC22.03■■□□□ 1.12
LCN2P80188 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.03■■□□□ 1.12
LCN2P80188 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.03■■□□□ 1.12
LCN2P80188 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LCN2P80188 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
LCN2P80188 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.02■■□□□ 1.12
LCN2P80188 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
LCN2P80188 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.01■■□□□ 1.11
LCN2P80188 MIR6090-201ENST00000622481 60 ntBASIC22.01■■□□□ 1.11
LCN2P80188 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LCN2P80188 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
LCN2P80188 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCN2P80188 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LCN2P80188 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LCN2P80188 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.98■■□□□ 1.11
LCN2P80188 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LCN2P80188 AC021231.2-201ENST00000594613 730 ntBASIC21.97■■□□□ 1.11
LCN2P80188 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms