Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.88■■□□□ 1.73
SLC6A12P48065 ST7-AS1-201ENST00000456775 1889 ntBASIC25.87■■□□□ 1.73
SLC6A12P48065 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SLC6A12P48065 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC6A12P48065 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC6A12P48065 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.86■■□□□ 1.73
SLC6A12P48065 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.86■■□□□ 1.73
SLC6A12P48065 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.85■■□□□ 1.73
SLC6A12P48065 AL135925.1-201ENST00000605920 1701 ntBASIC25.85■■□□□ 1.73
SLC6A12P48065 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC6A12P48065 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC6A12P48065 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC6A12P48065 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC6A12P48065 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SLC6A12P48065 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC6A12P48065 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
SLC6A12P48065 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC6A12P48065 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.82■■□□□ 1.72
SLC6A12P48065 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC6A12P48065 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SLC6A12P48065 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SLC6A12P48065 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC6A12P48065 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC6A12P48065 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.81■■□□□ 1.72
SLC6A12P48065 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC6A12P48065 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
SLC6A12P48065 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A12P48065 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.79■■□□□ 1.72
SLC6A12P48065 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
SLC6A12P48065 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLC6A12P48065 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLC6A12P48065 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC6A12P48065 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC6A12P48065 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.76■■□□□ 1.71
SLC6A12P48065 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SLC6A12P48065 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SLC6A12P48065 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SLC6A12P48065 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SLC6A12P48065 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SLC6A12P48065 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SLC6A12P48065 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
SLC6A12P48065 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SLC6A12P48065 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SLC6A12P48065 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SLC6A12P48065 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SLC6A12P48065 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
SLC6A12P48065 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLC6A12P48065 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLC6A12P48065 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLC6A12P48065 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
SLC6A12P48065 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLC6A12P48065 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SLC6A12P48065 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SLC6A12P48065 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SLC6A12P48065 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SLC6A12P48065 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.69■■□□□ 1.7
SLC6A12P48065 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SLC6A12P48065 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.69■■□□□ 1.7
SLC6A12P48065 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLC6A12P48065 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SLC6A12P48065 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SLC6A12P48065 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SLC6A12P48065 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SLC6A12P48065 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.67■■□□□ 1.7
SLC6A12P48065 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SLC6A12P48065 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SLC6A12P48065 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SLC6A12P48065 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SLC6A12P48065 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
SLC6A12P48065 ABCB10P3-201ENST00000561950 2166 ntBASIC25.65■■□□□ 1.7
SLC6A12P48065 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A12P48065 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.65■■□□□ 1.7
SLC6A12P48065 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A12P48065 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A12P48065 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A12P48065 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.65■■□□□ 1.7
SLC6A12P48065 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SLC6A12P48065 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLC6A12P48065 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.64■■□□□ 1.7
SLC6A12P48065 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC6A12P48065 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.63■■□□□ 1.69
SLC6A12P48065 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
SLC6A12P48065 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SLC6A12P48065 SUZ12P1-203ENST00000578195 985 ntBASIC25.62■■□□□ 1.69
SLC6A12P48065 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
SLC6A12P48065 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.61■■□□□ 1.69
SLC6A12P48065 AC010864.1-201ENST00000609407 1511 ntBASIC25.6■■□□□ 1.69
SLC6A12P48065 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.6■■□□□ 1.69
SLC6A12P48065 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SLC6A12P48065 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC6A12P48065 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC6A12P48065 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SLC6A12P48065 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC6A12P48065 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC6A12P48065 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
SLC6A12P48065 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
SLC6A12P48065 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SLC6A12P48065 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC6A12P48065 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SLC6A12P48065 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms