Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC33.65■■■□□ 2.98
COL11A2P13942 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
COL11A2P13942 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC33.64■■■□□ 2.98
COL11A2P13942 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
COL11A2P13942 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC33.63■■■□□ 2.97
COL11A2P13942 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
COL11A2P13942 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.62■■■□□ 2.97
COL11A2P13942 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC33.62■■■□□ 2.97
COL11A2P13942 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
COL11A2P13942 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC33.62■■■□□ 2.97
COL11A2P13942 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.62■■■□□ 2.97
COL11A2P13942 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC33.61■■■□□ 2.97
COL11A2P13942 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC33.61■■■□□ 2.97
COL11A2P13942 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.97
COL11A2P13942 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
COL11A2P13942 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.58■■■□□ 2.97
COL11A2P13942 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC33.58■■■□□ 2.97
COL11A2P13942 DUX4L11-201ENST00000611504 1267 ntBASIC33.58■■■□□ 2.97
COL11A2P13942 DUX4L12-201ENST00000614593 1267 ntBASIC33.58■■■□□ 2.97
COL11A2P13942 DUX4L14-201ENST00000621227 1267 ntBASIC33.58■■■□□ 2.97
COL11A2P13942 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
COL11A2P13942 LINC01971-201ENST00000617888 1048 ntBASIC33.57■■■□□ 2.96
COL11A2P13942 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
COL11A2P13942 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC33.56■■■□□ 2.96
COL11A2P13942 BRD4-212ENST00000630599 726 ntTSL 2 BASIC33.56■■■□□ 2.96
COL11A2P13942 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
COL11A2P13942 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33.56■■■□□ 2.96
COL11A2P13942 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
COL11A2P13942 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC33.55■■■□□ 2.96
COL11A2P13942 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
COL11A2P13942 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.55■■■□□ 2.96
COL11A2P13942 AGPS-202ENST00000409888 815 ntTSL 4 BASIC33.54■■■□□ 2.96
COL11A2P13942 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC33.54■■■□□ 2.96
COL11A2P13942 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
COL11A2P13942 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
COL11A2P13942 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
COL11A2P13942 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC33.53■■■□□ 2.96
COL11A2P13942 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.52■■■□□ 2.96
COL11A2P13942 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
COL11A2P13942 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC33.51■■■□□ 2.96
COL11A2P13942 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
COL11A2P13942 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC33.5■■■□□ 2.95
COL11A2P13942 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC33.5■■■□□ 2.95
COL11A2P13942 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
COL11A2P13942 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
COL11A2P13942 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
COL11A2P13942 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
COL11A2P13942 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
COL11A2P13942 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
COL11A2P13942 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
COL11A2P13942 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC33.48■■■□□ 2.95
COL11A2P13942 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
COL11A2P13942 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
COL11A2P13942 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC33.46■■■□□ 2.95
COL11A2P13942 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
COL11A2P13942 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC33.45■■■□□ 2.95
COL11A2P13942 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
COL11A2P13942 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC33.44■■■□□ 2.94
COL11A2P13942 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
COL11A2P13942 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
COL11A2P13942 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC33.42■■■□□ 2.94
COL11A2P13942 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
COL11A2P13942 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
COL11A2P13942 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC33.39■■■□□ 2.94
COL11A2P13942 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
COL11A2P13942 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
COL11A2P13942 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
COL11A2P13942 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC33.36■■■□□ 2.93
COL11A2P13942 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC33.36■■■□□ 2.93
COL11A2P13942 ABHD17AP3-201ENST00000503096 1137 ntBASIC33.33■■■□□ 2.93
COL11A2P13942 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
COL11A2P13942 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC33.31■■■□□ 2.92
COL11A2P13942 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
COL11A2P13942 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
COL11A2P13942 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
COL11A2P13942 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC33.3■■■□□ 2.92
COL11A2P13942 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
COL11A2P13942 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC33.28■■■□□ 2.92
COL11A2P13942 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
COL11A2P13942 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC33.28■■■□□ 2.92
COL11A2P13942 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC33.27■■■□□ 2.92
COL11A2P13942 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC33.26■■■□□ 2.92
COL11A2P13942 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC33.25■■■□□ 2.91
COL11A2P13942 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC33.25■■■□□ 2.91
COL11A2P13942 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
COL11A2P13942 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
COL11A2P13942 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
COL11A2P13942 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC33.25■■■□□ 2.91
COL11A2P13942 METRNL-202ENST00000570778 967 ntTSL 5 BASIC33.24■■■□□ 2.91
COL11A2P13942 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
COL11A2P13942 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
COL11A2P13942 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC33.22■■■□□ 2.91
COL11A2P13942 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC33.21■■■□□ 2.91
COL11A2P13942 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC33.21■■■□□ 2.91
COL11A2P13942 DUX4L13-201ENST00000554103 1267 ntBASIC33.2■■■□□ 2.91
COL11A2P13942 DUX4L15-201ENST00000611059 1267 ntBASIC33.2■■■□□ 2.91
COL11A2P13942 DUX4L23-201ENST00000615195 1269 ntBASIC33.2■■■□□ 2.91
COL11A2P13942 DUX4L24-201ENST00000617576 1269 ntBASIC33.2■■■□□ 2.91
COL11A2P13942 DUX4L22-201ENST00000618238 1269 ntBASIC33.2■■■□□ 2.91
COL11A2P13942 DUX4L20-201ENST00000619712 1269 ntBASIC33.2■■■□□ 2.91
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms