Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNYL3P0C7X3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCNYL3P0C7X3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNYL3P0C7X3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCNYL3P0C7X3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCNYL3P0C7X3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNYL3P0C7X3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.59■■□□□ 1.69
CCNYL3P0C7X3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CCNYL3P0C7X3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.58■■□□□ 1.69
CCNYL3P0C7X3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.58■■□□□ 1.69
CCNYL3P0C7X3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.58■■□□□ 1.69
CCNYL3P0C7X3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
CCNYL3P0C7X3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CCNYL3P0C7X3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCNYL3P0C7X3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CCNYL3P0C7X3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCNYL3P0C7X3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCNYL3P0C7X3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCNYL3P0C7X3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCNYL3P0C7X3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCNYL3P0C7X3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CCNYL3P0C7X3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.55■■□□□ 1.68
CCNYL3P0C7X3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.54■■□□□ 1.68
CCNYL3P0C7X3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.54■■□□□ 1.68
CCNYL3P0C7X3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.54■■□□□ 1.68
CCNYL3P0C7X3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CCNYL3P0C7X3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CCNYL3P0C7X3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.51■■□□□ 1.67
CCNYL3P0C7X3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.5■■□□□ 1.67
CCNYL3P0C7X3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNYL3P0C7X3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.49■■□□□ 1.67
CCNYL3P0C7X3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNYL3P0C7X3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCNYL3P0C7X3 ZNRF2P2-203ENST00000454624 420 ntBASIC25.47■■□□□ 1.67
CCNYL3P0C7X3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.47■■□□□ 1.67
CCNYL3P0C7X3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.47■■□□□ 1.67
CCNYL3P0C7X3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNYL3P0C7X3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNYL3P0C7X3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNYL3P0C7X3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNYL3P0C7X3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCNYL3P0C7X3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCNYL3P0C7X3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCNYL3P0C7X3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCNYL3P0C7X3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.45■■□□□ 1.66
CCNYL3P0C7X3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCNYL3P0C7X3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCNYL3P0C7X3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCNYL3P0C7X3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.44■■□□□ 1.66
CCNYL3P0C7X3 DUX4L29-201ENST00000425409 679 ntBASIC25.44■■□□□ 1.66
CCNYL3P0C7X3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCNYL3P0C7X3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCNYL3P0C7X3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.42■■□□□ 1.66
CCNYL3P0C7X3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
CCNYL3P0C7X3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCNYL3P0C7X3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCNYL3P0C7X3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCNYL3P0C7X3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.4■■□□□ 1.66
CCNYL3P0C7X3 HLA-V-202ENST00000446817 847 ntBASIC25.4■■□□□ 1.66
CCNYL3P0C7X3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCNYL3P0C7X3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.39■■□□□ 1.66
CCNYL3P0C7X3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.39■■□□□ 1.66
CCNYL3P0C7X3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCNYL3P0C7X3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.39■■□□□ 1.66
CCNYL3P0C7X3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCNYL3P0C7X3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNYL3P0C7X3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.38■■□□□ 1.65
CCNYL3P0C7X3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.37■■□□□ 1.65
CCNYL3P0C7X3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNYL3P0C7X3 AC108673.1-201ENST00000510422 1159 ntBASIC25.37■■□□□ 1.65
CCNYL3P0C7X3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.37■■□□□ 1.65
CCNYL3P0C7X3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.37■■□□□ 1.65
CCNYL3P0C7X3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCNYL3P0C7X3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNYL3P0C7X3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCNYL3P0C7X3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.36■■□□□ 1.65
CCNYL3P0C7X3 AC120057.4-201ENST00000624722 1615 ntBASIC25.36■■□□□ 1.65
CCNYL3P0C7X3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNYL3P0C7X3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNYL3P0C7X3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNYL3P0C7X3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCNYL3P0C7X3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.34■■□□□ 1.65
CCNYL3P0C7X3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNYL3P0C7X3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCNYL3P0C7X3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.31■■□□□ 1.64
CCNYL3P0C7X3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCNYL3P0C7X3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CCNYL3P0C7X3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCNYL3P0C7X3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.3■■□□□ 1.64
CCNYL3P0C7X3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.29■■□□□ 1.64
CCNYL3P0C7X3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCNYL3P0C7X3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCNYL3P0C7X3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNYL3P0C7X3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNYL3P0C7X3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.28■■□□□ 1.64
CCNYL3P0C7X3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.28■■□□□ 1.64
CCNYL3P0C7X3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCNYL3P0C7X3 AC021231.2-201ENST00000594613 730 ntBASIC25.28■■□□□ 1.64
CCNYL3P0C7X3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCNYL3P0C7X3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms