Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
MT-ND3P03897 ST7-AS1-201ENST00000456775 1889 ntBASIC26.98■■□□□ 1.91
MT-ND3P03897 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.98■■□□□ 1.91
MT-ND3P03897 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.97■■□□□ 1.91
MT-ND3P03897 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
MT-ND3P03897 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
MT-ND3P03897 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
MT-ND3P03897 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
MT-ND3P03897 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.96■■□□□ 1.91
MT-ND3P03897 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
MT-ND3P03897 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
MT-ND3P03897 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
MT-ND3P03897 AL161658.1-201ENST00000623641 1967 ntBASIC26.95■■□□□ 1.91
MT-ND3P03897 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
MT-ND3P03897 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MT-ND3P03897 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
MT-ND3P03897 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
MT-ND3P03897 SETD8P1-201ENST00000623146 1180 ntBASIC26.92■■□□□ 1.9
MT-ND3P03897 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
MT-ND3P03897 AC097358.2-201ENST00000607541 1159 ntBASIC26.9■■□□□ 1.9
MT-ND3P03897 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
MT-ND3P03897 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MT-ND3P03897 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MT-ND3P03897 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.88■■□□□ 1.89
MT-ND3P03897 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.88■■□□□ 1.89
MT-ND3P03897 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MT-ND3P03897 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
MT-ND3P03897 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.87■■□□□ 1.89
MT-ND3P03897 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
MT-ND3P03897 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
MT-ND3P03897 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
MT-ND3P03897 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
MT-ND3P03897 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
MT-ND3P03897 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
MT-ND3P03897 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
MT-ND3P03897 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.83■■□□□ 1.89
MT-ND3P03897 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.83■■□□□ 1.89
MT-ND3P03897 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.82■■□□□ 1.88
MT-ND3P03897 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
MT-ND3P03897 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
MT-ND3P03897 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
MT-ND3P03897 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
MT-ND3P03897 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.81■■□□□ 1.88
MT-ND3P03897 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MT-ND3P03897 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MT-ND3P03897 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
MT-ND3P03897 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
MT-ND3P03897 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
MT-ND3P03897 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
MT-ND3P03897 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
MT-ND3P03897 AC136428.2-201ENST00000563187 214 ntBASIC26.77■■□□□ 1.88
MT-ND3P03897 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
MT-ND3P03897 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
MT-ND3P03897 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.76■■□□□ 1.87
MT-ND3P03897 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.76■■□□□ 1.87
MT-ND3P03897 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
MT-ND3P03897 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.76■■□□□ 1.87
MT-ND3P03897 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
MT-ND3P03897 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
MT-ND3P03897 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
MT-ND3P03897 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
MT-ND3P03897 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.73■■□□□ 1.87
MT-ND3P03897 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
MT-ND3P03897 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
MT-ND3P03897 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
MT-ND3P03897 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
MT-ND3P03897 AL135925.1-201ENST00000605920 1701 ntBASIC26.7■■□□□ 1.87
MT-ND3P03897 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
MT-ND3P03897 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
MT-ND3P03897 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
MT-ND3P03897 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
MT-ND3P03897 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.67■■□□□ 1.86
MT-ND3P03897 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.66■■□□□ 1.86
MT-ND3P03897 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
MT-ND3P03897 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
MT-ND3P03897 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
MT-ND3P03897 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
MT-ND3P03897 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MT-ND3P03897 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MT-ND3P03897 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MT-ND3P03897 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
MT-ND3P03897 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.64■■□□□ 1.86
MT-ND3P03897 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.64■■□□□ 1.86
MT-ND3P03897 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
MT-ND3P03897 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.64■■□□□ 1.85
MT-ND3P03897 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
MT-ND3P03897 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MT-ND3P03897 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MT-ND3P03897 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MT-ND3P03897 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.61■■□□□ 1.85
MT-ND3P03897 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MT-ND3P03897 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.6■■□□□ 1.85
MT-ND3P03897 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MT-ND3P03897 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
MT-ND3P03897 SUZ12P1-203ENST00000578195 985 ntBASIC26.6■■□□□ 1.85
MT-ND3P03897 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
MT-ND3P03897 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
MT-ND3P03897 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
MT-ND3P03897 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
MT-ND3P03897 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms