Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
TTC4O95801 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
TTC4O95801 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TTC4O95801 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
TTC4O95801 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TTC4O95801 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TTC4O95801 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
TTC4O95801 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
TTC4O95801 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TTC4O95801 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TTC4O95801 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.25■■□□□ 1.95
TTC4O95801 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TTC4O95801 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
TTC4O95801 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.24■■□□□ 1.95
TTC4O95801 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
TTC4O95801 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
TTC4O95801 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
TTC4O95801 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
TTC4O95801 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
TTC4O95801 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TTC4O95801 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.2■■□□□ 1.94
TTC4O95801 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TTC4O95801 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
TTC4O95801 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TTC4O95801 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TTC4O95801 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
TTC4O95801 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.18■■□□□ 1.94
TTC4O95801 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TTC4O95801 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TTC4O95801 AL135925.1-201ENST00000605920 1701 ntBASIC27.16■■□□□ 1.94
TTC4O95801 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.16■■□□□ 1.94
TTC4O95801 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TTC4O95801 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TTC4O95801 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TTC4O95801 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
TTC4O95801 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TTC4O95801 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TTC4O95801 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TTC4O95801 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.93
TTC4O95801 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TTC4O95801 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.13■■□□□ 1.93
TTC4O95801 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.13■■□□□ 1.93
TTC4O95801 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.13■■□□□ 1.93
TTC4O95801 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.13■■□□□ 1.93
TTC4O95801 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC4O95801 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC4O95801 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC4O95801 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC4O95801 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.12■■□□□ 1.93
TTC4O95801 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TTC4O95801 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC4O95801 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.08■■□□□ 1.93
TTC4O95801 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TTC4O95801 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TTC4O95801 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
TTC4O95801 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TTC4O95801 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.06■■□□□ 1.92
TTC4O95801 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
TTC4O95801 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
TTC4O95801 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TTC4O95801 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TTC4O95801 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TTC4O95801 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TTC4O95801 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TTC4O95801 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.04■■□□□ 1.92
TTC4O95801 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC4O95801 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC4O95801 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC4O95801 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC4O95801 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.02■■□□□ 1.92
TTC4O95801 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.02■■□□□ 1.92
TTC4O95801 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TTC4O95801 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
TTC4O95801 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TTC4O95801 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TTC4O95801 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
TTC4O95801 AC142086.6-201ENST00000621154 1765 ntBASIC27.01■■□□□ 1.91
TTC4O95801 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TTC4O95801 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TTC4O95801 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27■■□□□ 1.91
TTC4O95801 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
TTC4O95801 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
TTC4O95801 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TTC4O95801 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TTC4O95801 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TTC4O95801 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TTC4O95801 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TTC4O95801 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.97■■□□□ 1.91
TTC4O95801 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.97■■□□□ 1.91
TTC4O95801 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.97■■□□□ 1.91
TTC4O95801 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TTC4O95801 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TTC4O95801 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.96■■□□□ 1.91
TTC4O95801 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.96■■□□□ 1.91
TTC4O95801 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
TTC4O95801 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
TTC4O95801 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
TTC4O95801 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
TTC4O95801 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.9
TTC4O95801 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms