Protein–RNA interactions for Protein: A0A0J9YX94

PNMA6F, Paraneoplastic antigen Ma6F, humanhuman

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6FA0A0J9YX94 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PNMA6FA0A0J9YX94 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PNMA6FA0A0J9YX94 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
PNMA6FA0A0J9YX94 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PNMA6FA0A0J9YX94 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PNMA6FA0A0J9YX94 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.84■■■□□ 2.53
PNMA6FA0A0J9YX94 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PNMA6FA0A0J9YX94 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
PNMA6FA0A0J9YX94 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.82■■■□□ 2.52
PNMA6FA0A0J9YX94 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PNMA6FA0A0J9YX94 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PNMA6FA0A0J9YX94 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.81■■■□□ 2.52
PNMA6FA0A0J9YX94 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.8■■■□□ 2.52
PNMA6FA0A0J9YX94 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.8■■■□□ 2.52
PNMA6FA0A0J9YX94 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PNMA6FA0A0J9YX94 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
PNMA6FA0A0J9YX94 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PNMA6FA0A0J9YX94 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PNMA6FA0A0J9YX94 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PNMA6FA0A0J9YX94 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.76■■■□□ 2.51
PNMA6FA0A0J9YX94 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.76■■■□□ 2.51
PNMA6FA0A0J9YX94 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PNMA6FA0A0J9YX94 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PNMA6FA0A0J9YX94 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.75■■■□□ 2.51
PNMA6FA0A0J9YX94 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PNMA6FA0A0J9YX94 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PNMA6FA0A0J9YX94 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PNMA6FA0A0J9YX94 AC044849.2-201ENST00000606596 710 ntBASIC30.74■■■□□ 2.51
PNMA6FA0A0J9YX94 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PNMA6FA0A0J9YX94 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PNMA6FA0A0J9YX94 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
PNMA6FA0A0J9YX94 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.73■■■□□ 2.51
PNMA6FA0A0J9YX94 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PNMA6FA0A0J9YX94 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.73■■■□□ 2.51
PNMA6FA0A0J9YX94 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.73■■■□□ 2.51
PNMA6FA0A0J9YX94 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
PNMA6FA0A0J9YX94 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PNMA6FA0A0J9YX94 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PNMA6FA0A0J9YX94 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
PNMA6FA0A0J9YX94 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
PNMA6FA0A0J9YX94 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
PNMA6FA0A0J9YX94 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PNMA6FA0A0J9YX94 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PNMA6FA0A0J9YX94 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.68■■■□□ 2.5
PNMA6FA0A0J9YX94 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.68■■■□□ 2.5
PNMA6FA0A0J9YX94 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PNMA6FA0A0J9YX94 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.68■■■□□ 2.5
PNMA6FA0A0J9YX94 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PNMA6FA0A0J9YX94 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PNMA6FA0A0J9YX94 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
PNMA6FA0A0J9YX94 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.67■■■□□ 2.5
PNMA6FA0A0J9YX94 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PNMA6FA0A0J9YX94 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
PNMA6FA0A0J9YX94 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PNMA6FA0A0J9YX94 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PNMA6FA0A0J9YX94 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PNMA6FA0A0J9YX94 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PNMA6FA0A0J9YX94 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
PNMA6FA0A0J9YX94 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PNMA6FA0A0J9YX94 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PNMA6FA0A0J9YX94 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PNMA6FA0A0J9YX94 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PNMA6FA0A0J9YX94 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
PNMA6FA0A0J9YX94 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.58■■■□□ 2.49
PNMA6FA0A0J9YX94 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PNMA6FA0A0J9YX94 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PNMA6FA0A0J9YX94 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PNMA6FA0A0J9YX94 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PNMA6FA0A0J9YX94 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PNMA6FA0A0J9YX94 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.56■■■□□ 2.48
PNMA6FA0A0J9YX94 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.56■■■□□ 2.48
PNMA6FA0A0J9YX94 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PNMA6FA0A0J9YX94 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PNMA6FA0A0J9YX94 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PNMA6FA0A0J9YX94 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
PNMA6FA0A0J9YX94 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.54■■■□□ 2.48
PNMA6FA0A0J9YX94 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.54■■■□□ 2.48
PNMA6FA0A0J9YX94 AC108673.1-201ENST00000510422 1159 ntBASIC30.54■■■□□ 2.48
PNMA6FA0A0J9YX94 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PNMA6FA0A0J9YX94 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PNMA6FA0A0J9YX94 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
PNMA6FA0A0J9YX94 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.53■■■□□ 2.48
PNMA6FA0A0J9YX94 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
PNMA6FA0A0J9YX94 MIR6090-201ENST00000622481 60 ntBASIC30.52■■■□□ 2.48
PNMA6FA0A0J9YX94 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PNMA6FA0A0J9YX94 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
PNMA6FA0A0J9YX94 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.51■■■□□ 2.47
PNMA6FA0A0J9YX94 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PNMA6FA0A0J9YX94 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.5■■■□□ 2.47
PNMA6FA0A0J9YX94 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
PNMA6FA0A0J9YX94 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.49■■■□□ 2.47
PNMA6FA0A0J9YX94 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.48■■■□□ 2.47
PNMA6FA0A0J9YX94 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
PNMA6FA0A0J9YX94 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
PNMA6FA0A0J9YX94 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PNMA6FA0A0J9YX94 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.46■■■□□ 2.47
PNMA6FA0A0J9YX94 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PNMA6FA0A0J9YX94 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
PNMA6FA0A0J9YX94 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.45■■■□□ 2.46
PNMA6FA0A0J9YX94 AC010864.1-201ENST00000609407 1511 ntBASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms