Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV25A0A0B4J276 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV25A0A0B4J276 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV25A0A0B4J276 AL161658.1-201ENST00000623641 1967 ntBASIC20.04■□□□□ 0.8
TRAV25A0A0B4J276 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV25A0A0B4J276 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV25A0A0B4J276 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV25A0A0B4J276 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV25A0A0B4J276 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV25A0A0B4J276 AL162393.1-201ENST00000437852 946 ntBASIC20.03■□□□□ 0.8
TRAV25A0A0B4J276 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
TRAV25A0A0B4J276 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRAV25A0A0B4J276 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV25A0A0B4J276 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRAV25A0A0B4J276 DUX4L28-201ENST00000623687 678 ntBASIC20.02■□□□□ 0.8
TRAV25A0A0B4J276 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV25A0A0B4J276 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.01■□□□□ 0.79
TRAV25A0A0B4J276 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV25A0A0B4J276 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV25A0A0B4J276 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV25A0A0B4J276 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV25A0A0B4J276 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV25A0A0B4J276 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV25A0A0B4J276 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV25A0A0B4J276 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV25A0A0B4J276 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV25A0A0B4J276 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV25A0A0B4J276 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV25A0A0B4J276 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV25A0A0B4J276 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV25A0A0B4J276 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRAV25A0A0B4J276 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV25A0A0B4J276 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV25A0A0B4J276 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV25A0A0B4J276 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV25A0A0B4J276 AC044849.2-201ENST00000606596 710 ntBASIC19.95■□□□□ 0.78
TRAV25A0A0B4J276 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV25A0A0B4J276 AC087741.3-201ENST00000624270 1347 ntBASIC19.95■□□□□ 0.78
TRAV25A0A0B4J276 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV25A0A0B4J276 RPS2P35-201ENST00000443417 897 ntBASIC19.94■□□□□ 0.78
TRAV25A0A0B4J276 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV25A0A0B4J276 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV25A0A0B4J276 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV25A0A0B4J276 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV25A0A0B4J276 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV25A0A0B4J276 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV25A0A0B4J276 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV25A0A0B4J276 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV25A0A0B4J276 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.92■□□□□ 0.78
TRAV25A0A0B4J276 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV25A0A0B4J276 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV25A0A0B4J276 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV25A0A0B4J276 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV25A0A0B4J276 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV25A0A0B4J276 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV25A0A0B4J276 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV25A0A0B4J276 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV25A0A0B4J276 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV25A0A0B4J276 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
TRAV25A0A0B4J276 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV25A0A0B4J276 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV25A0A0B4J276 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV25A0A0B4J276 AC108673.1-201ENST00000510422 1159 ntBASIC19.88■□□□□ 0.77
TRAV25A0A0B4J276 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRAV25A0A0B4J276 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV25A0A0B4J276 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
TRAV25A0A0B4J276 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAV25A0A0B4J276 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV25A0A0B4J276 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAV25A0A0B4J276 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV25A0A0B4J276 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
TRAV25A0A0B4J276 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV25A0A0B4J276 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV25A0A0B4J276 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV25A0A0B4J276 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRAV25A0A0B4J276 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV25A0A0B4J276 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAV25A0A0B4J276 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAV25A0A0B4J276 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV25A0A0B4J276 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV25A0A0B4J276 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRAV25A0A0B4J276 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV25A0A0B4J276 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRAV25A0A0B4J276 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV25A0A0B4J276 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV25A0A0B4J276 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV25A0A0B4J276 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRAV25A0A0B4J276 AL135925.1-201ENST00000605920 1701 ntBASIC19.8■□□□□ 0.76
TRAV25A0A0B4J276 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TRAV25A0A0B4J276 AC010864.1-201ENST00000609407 1511 ntBASIC19.8■□□□□ 0.76
TRAV25A0A0B4J276 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV25A0A0B4J276 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TRAV25A0A0B4J276 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRAV25A0A0B4J276 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV25A0A0B4J276 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV25A0A0B4J276 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV25A0A0B4J276 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV25A0A0B4J276 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV25A0A0B4J276 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRAV25A0A0B4J276 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms